Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq4651 114 1e-20 >seq4651 Length=474197 Score = 114 bits (126), Expect = 1e-20 Identities = 196/282 (70%), Gaps = 2/282 (1%) Strand=Plus/Plus Query 27153 GTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTC-TAGCC 27211 ||| | |||||||| ||| ||| || ||| || || || ||||| | ||||| Sbjct 349697 GTGGTTCAGGTAGAGGTGGCAGTCGCCGCCGGTCCACACGAAATCGCCCGGCGCGTAGCC 349756 Query 27212 CGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCC 27271 | || || |||| ||| ||||| ||| | ||||||||||||||| ||||| || | Sbjct 349757 -GCACACCTGGGCCACCATCATCGTGAAGAGCGCGTAGCTGGCGATGTTGAAGGGAACGC 349815 Query 27272 CGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGT 27331 | || ||||| | | ||| |||||||| ||||| |||| || ||| |||| Sbjct 349816 CCAGGAAGATGTCGGCGCTGCGCTGATAGAGCTGGCACGACAGCTTGCCGTCGGCCACGT 349875 Query 27332 AAAACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCC 27391 | ||||| | | |||||||| || || || |||||| || ||| ||| ||||||| Sbjct 349876 AGAACTGGAACAGCGCGTGGCAGGGCGGCAGGGCCATGCGGTCCACGTCGGCCGGGTTCC 349935 Query 27392 AGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA 27433 |||| |||||||| ||| | | || ||||| ||| ||| Sbjct 349936 AGGCCGACACGATGTGGCGGCGGGAGTCCGGGTTCTTCTTGA 349977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369485777473667