Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_030931.1 Length=41871 Score E Sequences producing significant alignments: (Bits) Value seq1398 205 2e-48 >seq1398 Length=15916 Score = 205 bits (226), Expect = 2e-48 Identities = 225/297 (76%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 25701 ATCAGCATCTTCGACCCGATCGGGTACGACTGGTGGACTGGCGAGGGCGTCACGGCCAAG 25760 |||| ||||| ||||| |||||| | ||||||||||| || || ||| ||||| ||| Sbjct 14299 ATCACCATCTACGACCAGATCGGCGAGGACTGGTGGACAGGTGAAGGCACTACGGCTAAG 14240 Query 25761 CGCATCAGCGCCGCGTTGCGAGCCATGAAGGATGCCGACGTGGTGGTGAACATCAACAGC 25820 |||||||||| || | || ||||| || ||| ||| ||||||||||| Sbjct 14239 CGCATCAGCGGAGCCCTTCGCGCCATCGGCGACAAGCACGCCACGGTCTACATCAACAGC 14180 Query 25821 CCTGGCGGAGATGTCTTCGAGGGGCTGGCGATCTACAACCTGCTGCGCGAGCACAAGGGC 25880 |||||||| || || |||||||| |||||||||||||||||||||||||||||| || | Sbjct 14179 CCTGGCGGCGACGTGTTCGAGGGCCTGGCGATCTACAACCTGCTGCGCGAGCACGCGG-C 14121 Query 25881 AAG-GTCACCGTACGCGTGCTCGGCCTGGCAGCTTCCGCAGCGTCGTTCATTGCCATGGC 25939 | | || ||||| ||| ||||| |||| || ||| ||| || |||| |||||||| Sbjct 14120 AGGCGTGACCGTCAAGGTGGTCGGCGTGGCGGCCAGCGCGGCGGCGATCATCGCCATGGC 14061 Query 25940 GGCCGATGAGGTGAAGATCGCCCGCGCCGGCTTCCTGATGATCCACAACGCCTGGAC 25996 || |||| || | ||||| ||||||||||||||||||||||| | ||||| Sbjct 14060 GGGGTCGCGGGTGGAGGTTGCCCGAGCCGGCTTCCTGATGATCCACAATTCGTGGAC 14004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133858038015922