Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq4651 113 6e-20 >seq4651 Length=474197 Score = 113 bits (124), Expect = 6e-20 Identities = 174/246 (71%), Gaps = 2/246 (1%) Strand=Plus/Minus Query 99197 AAGAAAGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAAT 99256 |||| ||||| || || ||||| ||||| || | ||||| |||||||| ||| || Sbjct 350281 AAGATGGACCGCACCGGCACCGGCACCCTCTCGGTCTTCGGCTGGCAGATGCGCTTCGAT 350222 Query 99257 CTGCAAGAAGGCTTTCCGCTGGTAACGACTAAGC-GCTGTCACATGCGTTCGATTATTCA 99315 || || || ||||||||| | || || ||| ||| |||| || ||||| || || Sbjct 350221 CTCGCCGACGGTTTTCCGCTGCTCACCACCAAGAAGCTC-CACACCCGCTCGATCATCCA 350163 Query 99316 CGAACTGCTGTGGTTCCTGAAAGGCGATACCAATGTCAAATATTTAAATGATAATGGTGT 99375 ||| ||||||||||||||| ||||| ||||| || ||| | || || || || Sbjct 350162 CGAGCTGCTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTCAAGGACAACAAGGT 350103 Query 99376 AACTATTTGGGACGAATGGAAGAACAAAGATGGCGACCTCGGACCGGTATACGGTAAACA 99435 | || |||||||| ||| || | | ||||| || || ||||| ||||| || || Sbjct 350102 TTCGATCTGGGACGAGTGGGCCGACGAGAACGGCGAGCTGGGCCCGGTGTACGGCAAGCA 350043 Query 99436 GTGGCG 99441 |||||| Sbjct 350042 GTGGCG 350037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716421397259400