Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq4651 145 1e-29 seq4037 127 3e-24 >seq4651 Length=474197 Score = 145 bits (160), Expect = 1e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 202543 AAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGAC 202602 |||| ||||| |||||||||||||| | ||| | ||||| |||||||| || || Sbjct 350281 AAGATGGACCGCACCGGCACCGGCACCCTCTCGGTCTTCGGCTGGCAGATGCGCTTCGAT 350222 Query 202603 CTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCAC 202662 || |||| || || || ||| | ||||| || ||| | ||| ||| || ||||| ||| Sbjct 350221 CTCGCCGACGGTTTTCCGCTGCTCACCACCAAGAAGCTCCACACCCGCTCGATCATCCAC 350162 Query 202663 GAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTC 202722 |||||||||||||||||| || |||||||||||| | || || || || ||| ||| Sbjct 350161 GAGCTGCTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTCAAGGACAACAAGGTT 350102 Query 202723 ACTATCTGGGACGAATGGGC 202742 | ||||||||||| ||||| Sbjct 350101 TCGATCTGGGACGAGTGGGC 350082 >seq4037 Length=4543 Score = 127 bits (140), Expect = 3e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 202549 GACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATGCGGTTTGACCTGACC 202608 ||||| || ||||| ||||| | ||||||| ||||||||| || ||||||| | Sbjct 4109 GACCGCACGGGCACGGGCACCAAGAGCGTGTTCGGCTACCAGATGCGCTTCGACCTGAAC 4168 Query 202609 GAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCTATCATTCACGAGCTG 202668 || ||||| || ||||||||||| || ||||| ||||| || ||||| ||||||| Sbjct 4169 GAGGGCTTTCCGCTGGTGACCACCAAGAAGGTGCACCTGAAGTCCATCATCGTCGAGCTG 4228 Query 202669 CTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGATAACGGGGTCACTATC 202728 ||||||||||| | || || | ||| || | ||||| || ||| || || ||| Sbjct 4229 CTGTGGTTCCTTACCGGTTCCAGCGACAACAACTGGCTGAAGGAACGCGGCGTGACGATC 4288 Query 202729 TGGGACGAATGGGCGCGGGATGA 202751 |||||||| |||||||| || || Sbjct 4289 TGGGACGAGTGGGCGCGCGAAGA 4311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788273124522000