Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031029.1 Length=93686 Score E Sequences producing significant alignments: (Bits) Value seq810 145 5e-30 >seq810 Length=78467 Score = 145 bits (160), Expect = 5e-30 Identities = 270/393 (69%), Gaps = 10/393 (3%) Strand=Plus/Minus Query 7184 GACCGGGTCAACCGTCAGTTCACCGCGGCGGCACCGAACGCGTTGTGGGTGGCGGACCTG 7243 |||| ||||||||| ||||||| ||| | |||||| |||||||||| ||| | Sbjct 44406 GACCTGGTCAACCGGCAGTTCAGTGCGCAGCGCCCGAACCAGTTGTGGGTGAGCGACTTC 44347 Query 7244 ACCTACATCCGCACCCACTCGGGCTGGGTGTACGCGGCGTTCGTCCTGGACGTGTTCTCG 7303 || ||| || ||| ||||||| |||||| ||| ||||| | |||||||||||| Sbjct 44346 ACATACGTCTCGACCTGGCAGGGCTGGCTGTACGTGGCCTTCGTGATCGACGTGTTCTCG 44287 Query 7304 CGGATGGTCGTCGGCTGGCAGGTCTCGACCACCATGCACACCGACCTCGCCCTCGACGCC 7363 ||| |||| ||||||| ||| |||| ||||| ||| ||| ||||| || Sbjct 44286 CGGCGCATCGTGGGCTGGCGGGTGAGCACCAGCATGCGGGTGGACTTCGTGCTCGATGCT 44227 Query 7364 CTGAACATGGGATTGTGGGCACGGTCGCGTGCCGGCCACGACGTGGCCGGGCTGATCCAC 7423 ||| | || |||| || ||| || || | |||| | || ||| | Sbjct 44226 CTGGAGCAGGCCTTGTACGCTCGGCAGCCTGGTGCGCACG----GTCC--GCTCGTGTGT 44173 Query 7424 CACTCCGACCGCGGAGTGCAATACCGAGCCATCCGCTACACCGAACGACTGGCCGAAGCC 7483 ||||||||| | ||| ||||||| ||||||||||||||| || |||||||| ||| Sbjct 44172 CACTCCGACAGGGGATCGCAATACGTCAGCATCCGCTACACCGAGCGGCTGGCCGAGGCC 44113 Query 7484 GAAGCGGTGA--CATCTGTTGGCTCCAAAGGGGATTCATACGACAACGCGATGGCTGAGG 7541 | || || | || || ||| ||| || || || || |||||||| |||| ||| Sbjct 44112 G--GCATCGAACCTTCGGTAGGCAGCAAGGGCGACTCCTATGACAACGCCCTGGCCGAGA 44055 Query 7542 CGTTCAACTCGCTGTTCAAAGCCGAATGCATCC 7574 || ||||| ||||| ||| ||||| | |||| Sbjct 44054 CGATCAACGGGCTGTACAAGGCCGAGTTGATCC 44022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299653026327619