Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031080.1 Length=160985 Score E Sequences producing significant alignments: (Bits) Value seq4651 87.8 2e-12 >seq4651 Length=474197 Score = 87.8 bits (96), Expect = 2e-12 Identities = 124/170 (73%), Gaps = 6/170 (4%) Strand=Plus/Plus Query 120444 CCAAGCCCAA-GCCGTGCCTGTGCGGGCCGGGCCGTGGATCCGCCGGAGGCTCGCTGGTC 120502 ||||| ||| | |||||| ||| |||||||| || || |||| || ||||||||||| Sbjct 333646 CCAAGAACAACGGCGTGCCGGTG-GGGCCGGGGCGGGGCTCCGGCGCGGGCTCGCTGGTG 333704 Query 120503 ACCTACGTCATGGGCATCACCTCGATCGATCCGATCAAGTACGACCTGATGTTCGAGCGC 120562 ||||| || |||||| |||||||| || |||| ||| ||||||||||| Sbjct 333705 GCCTACTCGCTGAAGATCACCGACCTCGATCCGCTCGCCTACGCGCTGCTGTTCGAGCGC 333764 Query 120563 TTCATCAACCCGGATC--GCCCCGACTTTCCCGACATCGACGTCGACTTC 120610 ||| | ||||| || | | ||| | |||||| ||||| |||||||| Sbjct 333765 TTCCTGAACCCCGAGCGGGTGTCGA--TGCCCGACTTCGACATCGACTTC 333812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 514993375385400