Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq888 129 6e-25 >seq888 Length=58548 Score = 129 bits (142), Expect = 6e-25 Identities = 275/411 (67%), Gaps = 0/411 (0%) Strand=Plus/Minus Query 136382 AAGATTTCATTGCCAACACCAATTATGTCTGGTGTTCGTACTCCAACCCGCCAGTTCAGT 136441 |||||||| |||| || || |||||||| || || || || || | ||||||||||| Sbjct 24567 AAGATTTCGCTGCCTACCCCCATTATGTCCGGCGTGCGCACGCCCATGCGCCAGTTCAGC 24508 Query 136442 TCATGCGTAGTTATTGAAGGTGGTGATAGTCTTAATTCAATTAACGAAGCCGCTGCATCA 136501 || ||||| | || ||| | | || || || || || |||| || | | Sbjct 24507 TCGTGCGTGCTGATCGAATGCGACGACAGCCTGGATGGCATCAACGCCACCACCAGCGCC 24448 Query 136502 ATTACGAAATACATTAGTAAGCGTGCTGGTATTGGTATTAATGCGGGGATGATTCGTGCA 136561 || || ||| | |||| ||||| || || || |||| || || ||||| Sbjct 24447 ATCGTCAAGTACGTGTCGCAGCGCGCTGGCATCGGCATCAATGGCGGCCGTATCCGTGCC 24388 Query 136562 GAAGGATCAAAAATTGGATTCGGTGAAGTCAAGCATACTGGTGTTATTCCTTTCTGGAAA 136621 | || |||| | ||| |||| |||| || || | || |||| || Sbjct 24387 GTGGGCAGCGAAATCCGGGGCGGCGAAGCGCAGCACACGGGCTGCCTGCCCTTCTTCAAG 24328 Query 136622 CACTTCCAAACCGCAGTTAAGTCATGCTCCCAAGGCGGAGTCCGTGGTGGTGCAGCTACA 136681 ||||| | || || ||||| ||||| || ||||| || || || || || || || Sbjct 24327 ATGTTCCAGGCTGCCGTCAAGTCCTGCTCGCAGGGCGGTGTGCGGGGAGGGGCGGCCACG 24268 Query 136682 CTGTATTATCCGATGTGGCACTTGGAAGTTGAAAACCTCCTCGTACTTAAGAACAACAAA 136741 |||| || || |||||||| ||||||| ||| || || || || ||||||||| Sbjct 24267 CTGTTCTACCCCCTGTGGCACCTGGAAGTGGAATCGCTGCTGGTGCTCAAGAACAACCGC 24208 Query 136742 GGTGTAGATGAAAACCGTATTCGCCATTTAGATTATGGTGTTCAGATTAAT 136792 ||||| || |||||||| ||||||||||| || |||||||| ||||| ||| Sbjct 24207 GGTGTGGAGGAAAACCGCATTCGCCATTTGGACTATGGTGTGCAGATCAAT 24157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539865496338960