Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20aegypti_20[genbank_20GCA_5F000004015.3_202014-04-30] 4,757 sequences; 1,383,974,186 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq4651 113 7e-20 seq4037 93.3 7e-14 >seq4651 Length=474197 Score = 113 bits (124), Expect = 7e-20 Identities = 118/155 (76%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||||||| |||| ||||| || || || | || ||||||||| ||| | Sbjct 350236 CAGATGCGCTTCGATCTCGCCGACGGTTTTCCGCTGCTCACCACCAAGAAGCTCCACACC 350177 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 || || ||||| ||||||||| |||||||||| ||| |||||||| ||| |||||| Sbjct 350176 CGCTCGATCATCCACGAGCTGCTGTGGTTCCTGCGCGGCGACACCAACATCCGGTATCTC 350117 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGC 200291 || || ||||| || | || |||||||| ||||| Sbjct 350116 AAGGACAACAAGGTTTCGATCTGGGACGAGTGGGC 350082 >seq4037 Length=4543 Score = 93.3 bits (102), Expect = 7e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 200137 CAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACCAAGAAGTGCCATCTC 200196 |||||||||||| | || | || ||||| || ||||||| ||||||||| || || Sbjct 4148 CAGATGCGCTTCGACCTGAACGAGGGCTTTCCGCTGGTGACCACCAAGAAGGTGCACCTG 4207 Query 200197 CGTTCCATCATTCACGAGCTGTTGTGGTTCCTTAACGGTGACACCAATATCAAGTATCTG 200256 |||||||| ||||||| |||||||||||| |||| || | | | ||| | ||| Sbjct 4208 AAGTCCATCATCGTCGAGCTGCTGTGGTTCCTTACCGGTTCCAGCGACAACAACTGGCTG 4267 Query 200257 AACGATAACAATGTCACCATTTGGGACGAATGGGCGCGAGACGA 200300 || || | || || || |||||||| |||||||| || || Sbjct 4268 AAGGAACGCGGCGTGACGATCTGGGACGAGTGGGCGCGCGAAGA 4311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783313419456000