Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_000899.1 Length=45063 Score E Sequences producing significant alignments: (Bits) Value seq1183 96.9 1e-15 seq1315 91.5 4e-14 >seq1183 Length=7533919 Score = 96.9 bits (106), Expect = 1e-15 Identities = 133/185 (72%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 1037 CCCGAGGCGTGT-ACGGGCGCATAGCCCCTCGTTCGGGCTTGGCCGTAAAGTTTTTTATC 1095 || |||| |||| ||||||| | || || || || || |||||||| ||| || ||| Sbjct 583118 CCGGAGGGGTGTTACGGGCGTGTTGCTCCCCGATCCGGATTGGCCGTGAAGAACTTCATC 583059 Query 1096 GATGTGGGAGCCGGTGTTATCGATAGCGATTACCGGGGCATCGTTAGCGTCCTCCTTTTC 1155 |||||||| ||||| || ||||| || ||||| |||| | |||| | || ||| Sbjct 583058 GATGTGGGCGCCGGCGTCGTCGATGAGGACTACCGTGGCAATCTGGGCGTGGTGCTGTTC 582999 Query 1156 AATTTTTCGGACCACAATTTCAACGTCCGTCGGGGCGATCGCATAGCTCAGTTAATTTTG 1215 || ||||||| || | ||||| || ||||| |||||||| || ||||| || | Sbjct 582998 AACCATTCGGACAACGAATTCAAGGTGGCCCGGGGTGATCGCATTGCGCAGTTTATCTGC 582939 Query 1216 GAGCG 1220 ||||| Sbjct 582938 GAGCG 582934 >seq1315 Length=4632993 Score = 91.5 bits (100), Expect = 4e-14 Identities = 132/185 (71%), Gaps = 1/185 (1%) Strand=Plus/Minus Query 1037 CCCGAGGCGTG-TACGGGCGCATAGCCCCTCGTTCGGGCTTGGCCGTAAAGTTTTTTATC 1095 || |||| ||| ||||| || | || ||||| || || |||||||| ||| || ||| Sbjct 1283793 CCGGAGGGGTGCTACGGCCGGGTTGCTCCTCGATCCGGATTGGCCGTGAAGAACTTCATC 1283734 Query 1096 GATGTGGGAGCCGGTGTTATCGATAGCGATTACCGGGGCATCGTTAGCGTCCTCCTTTTC 1155 |||||||| ||||| || ||||| || ||||| |||| | | || | | ||| Sbjct 1283733 GATGTGGGCGCCGGCGTCGTCGATGAGGACTACCGTGGCAATCTGGGTGTGGTGTTGTTC 1283674 Query 1156 AATTTTTCGGACCACAATTTCAACGTCCGTCGGGGCGATCGCATAGCTCAGTTAATTTTG 1215 || ||||||| || | ||||| || |||||| |||||||| || ||||| || | Sbjct 1283673 AACCATTCGGACAACGAATTCAAGGTGGCTCGGGGTGATCGCATTGCGCAGTTTATCTGC 1283614 Query 1216 GAGCG 1220 ||||| Sbjct 1283613 GAGCG 1283609 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144075833836750