Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq1400 98.7 1e-15 seq1371 86.0 6e-12 >seq1400 Length=7880666 Score = 98.7 bits (108), Expect = 1e-15 Identities = 195/284 (69%), Gaps = 6/284 (2%) Strand=Plus/Minus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994 |||||||| || |||||||| || || ||||| ||| || ||| ||||||| || Sbjct 4958914 TTCATGTAGCGGATCTTTCCGAACACTTCCCGCTCACGCCA-GCCCTGGTCGTGGATGCC 4958856 Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTT 119054 || | | ||| | || || |||||||| || || ||| ||||| | || ||| Sbjct 4958855 CGCAATGGACCACATGCAGCCAACGTATCCATTTGGGTCTCGGCCGTCCAGCTGGTAGCG 4958796 Query 119055 ATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCATTCCAGT 119112 |||||| | |||||| | || | | ||| |||||||| || |||| || || Sbjct 4958795 ATCGTTGAGGTAGATC--GCCGTCTCCAGAGCTTCCTCCGGAGTTTTTGTCCACTCGAGA 4958738 Query 119113 AtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGA 119172 || || || ||||||||||| || | | ||||||||||| || || || | ||| || Sbjct 4958737 ATCTTCTTCGCCCAGTACATGCGAAGGAAACCGTGCATTTTGCCTTCCTTGACCATTTGG 4958678 Query 119173 AGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACGGGCGTGTTC 119216 | || || | |||||||||| || || || || || || || Sbjct 4958677 ATCTGCGCCGAGTTCCATAGATCGTCATGGGTTCGAGCTTGCTC 4958634 >seq1371 Length=8723579 Score = 86.0 bits (94), Expect = 6e-12 Identities = 192/284 (68%), Gaps = 6/284 (2%) Strand=Plus/Plus Query 118936 TTCATGTATCGTATCTTTCCAAATACGGTACGCTCCTTCCATGCTCTG-TCGTGGAGTCC 118994 |||||||| || || ||||| || || || || ||| || ||| || |||| || Sbjct 8603524 TTCATGTAGCGGATTTTTCCGAACACTTCCCGTTCACGCCA-GCCCTGGTCATGGATGCC 8603582 Query 118995 TGCTACTGCCCATAGACATCCCACGTATCCGTTGGGATCTGTTCCGTCTAACTCGTACTT 119054 || | | ||| | || || |||||||| || || ||| ||||| | || ||| Sbjct 8603583 CGCAATGGACCACATGCAGCCAACGTATCCATTTGGGTCTCGGCCGTCCAGCTGGTAGCG 8603642 Query 119055 ATCGTTTAAGTAGATACAGACGCTTAACGCACTT--TCCGGAGTCTTACTCCATTCCAGT 119112 |||||| | ||| || | || | | ||| |||||||| ||| |||| || || Sbjct 8603643 ATCGTTGAGGTAAATC--GCCGTCTCCAGGGCTTCCTCCGGAGTTTTAGTCCACTCGAGA 8603700 Query 119113 AtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGTTAATCATCTGA 119172 || || || ||||||||||| || | | ||||||||||| || || || | ||| || Sbjct 8603701 ATCTTCTTCGCCCAGTACATGCGAAGGAAACCGTGCATTTTGCCTTCTTTGACCATTTGG 8603760 Query 119173 AGTTGTGCGGTGTTCCATAGAGGATCGTGTGTACGGGCGTGTTC 119216 | || || | |||||||||| || || || || || || || Sbjct 8603761 ATCTGCGCCGAGTTCCATAGATCGTCATGGGTTCGAGCTTGCTC 8603804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511398833824200