Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq1144 86.0 5e-12 >seq1144 Length=440944 Score = 86.0 bits (94), Expect = 5e-12 Identities = 234/352 (66%), Gaps = 10/352 (3%) Strand=Plus/Plus Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848 || || || || || | ||||| ||||| ||| | || || || || |||||||| Sbjct 369971 GGTGATCTAGGGCCGGTATACGGATTCCAATGGCGTCACTTCGGCGCCAAATATAAAACG 370030 Query 18849 TGTCAATCAAACTATTT-ACAG--CAAGGAATCGATCAGCTGCAAACTGTTATAGATACA 18905 ||||| || ||| || | || ||||| || ||| || | |||||| | Sbjct 370031 TGTCATG---ACGATTACACTGGACAGGGAATTGACCAGTTGGCAGAAGTTATAAACCGT 370087 Query 18906 ATTAAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATC 18965 |||||||| || | ||||| || ||||| | |||||| | |||||| Sbjct 370088 ATTAAAACCAATGCTACTGATCGACGTATTATTATGAGTGCATGGAATGTTATGGATATA 370147 Query 18966 CCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAA 19025 ||| ||||| || || || || ||| || || |||| ||| ||||| || ||| Sbjct 370148 CCCCAAATGGCCCTCCCACCCTGCCACTGCTTGGCACAATTTTTCGTAGCAAATGGAGAA 370207 Query 19026 TTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATT 19085 | || || || |||| || |||| | ||| ||||| || || || || ||||||||| Sbjct 370208 CTTTCTTGTCAGTTATATCAACGATCAGCGGACATGGGTCTCGGAGTTCCATTCAACATT 370267 Query 19086 GCTGGATATGCACTTCTTACCTACATA--GTAGCGCATGTTACAGGACTTAA 19135 ||| | ||||| || ||| | ||||| |||| || ||||| ||||| || Sbjct 370268 GCTAGCTATGC-TTTGTTAAC-ACATATGATAGCTCAGGTTACTGGACTGAA 370317 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399492144094575