Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09]
2,435 sequences; 2,247,306,217 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq1144 129 4e-25
>seq1144
Length=440944
Score = 129 bits (142), Expect = 4e-25
Identities = 240/345 (70%), Gaps = 8/345 (2%)
Strand=Plus/Minus
Query 97115 CAGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCC 97174
|||| || || || |||||| ||||| | || ||||||||||||||| || || || |
Sbjct 370310 CAGTAACCTGAGCTATCATATGTGTTAACAAAGCATAGCTAGCAATGTTGAATGGAACTC 370251
Query 97175 CTAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAGCTTTCCATCACACACAT 97234
| || ||||| || ||||||| ||||||||||||||| ||||| | ||||| ||
Sbjct 370250 CGAGACCCATGTCCGCTGATCGTTGATATAACTGACAAGAAAGTTCTCCATTTGCTACGA 370191
Query 97235 AAAACTGACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCC 97294
|||| || ||| || ||||| || | ||||||| || | ||| | |||||||
Sbjct 370190 AAAATTGTGCCAAGCAGTGGCAGGGTGGGAGGGCCATTTGGGGTATATCCATAACATTCC 370131
Query 97295 AAGCACACATCAACATTCTTCTATCGGTTGGGTTTGTGT--GTATGGTAT-TAATTATCT 97351
| |||| ||| | || | || ||| || | || || | || ||| | ||| | |||
Sbjct 370130 ATGCACTCATAATAATACGTCGATCAGTAGCATTGGTTTTAATACGGTTTATAACT-TCT 370072
Query 97352 GCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTTAAGAC-CTTGATATTCTGCT 97410
|| || || |||| || | |||| |||| || | | | || || ||||| ||
Sbjct 370071 GC--CAACTGGTCAATTCCCTGTCCAGTGTAATCGT-CATGACACGTTTTATATTTGGCG 370015
Query 97411 CCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCT 97455
|| || || | |||||||||||| || || || || || || |||
Sbjct 370014 CCGAAGTGACGCCATTGGAATCCGTATACCGGCCCTAGATCACCT 369970
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346773708642950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |