Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq1144 105 5e-18 >seq1144 Length=440944 Score = 105 bits (116), Expect = 5e-18 Identities = 231/343 (67%), Gaps = 10/343 (3%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGT---- 20273 || ||| | || || || || ||||| |||||| | || || || || ||||| Sbjct 369971 GGTGATCTAGGGCCGGTATACGGATTCCAATGGCGTCACTTCGGCGCCAAATATAAAACG 370030 Query 20274 TGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTT 20333 || ||||| | ||| |||||| ||| | || || || | | ||||| || Sbjct 370031 TGTCATGACGA----TTACACTGGACAGGGAATTGACCAGTTGGCAGAAGTTATAAACCG 370086 Query 20334 AATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGT 20393 |||||||| || | | || || | |||||| | | || ||||| | || ||| | Sbjct 370087 TATTAAAACCAATGCTACTGATCGACGTATTATTATGAGTGCATGGAATGTTATGGATAT 370146 Query 20394 GCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGTTGCTAATAATG 20452 || |||||| | || || || || |||| || ||||||| ||| || ||| | Sbjct 370147 ACCCCAAATGGCCCTCCCACCCTGCCAC-TGCTTGGCACAATTTTTCGTAGCAAATGGAG 370205 Query 20453 AATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATA 20512 || | || ||||| | ||||||||||| || || ||||| || || ||||| ||||| | Sbjct 370206 AACTTTCTTGTCAGTTATATCAACGATCAGCGGACATGGGTCTCGGAGTTCCATTCAACA 370265 Query 20513 TTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTAC 20555 |||| || ||||| || | || ||||||| || || ||||| Sbjct 370266 TTGCTAGCTATGCTTTGTTAACACATATGATAGCTCAGGTTAC 370308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399172153591075