Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq1144 147 4e-30 seq95 95.1 2e-14 >seq1144 Length=440944 Score = 147 bits (162), Expect = 4e-30 Identities = 219/304 (72%), Gaps = 10/304 (3%) Strand=Plus/Plus Query 35396 GGAGATTTGGGACCCGTATACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACC 35455 || ||| | || || ||||||||||||||||||||||| || || || ||||| | || Sbjct 369971 GGTGATCTAGGGCCGGTATACGGATTCCAATGGCGTCACTTCGGCGCCAAATATAAAACG 370030 Query 35456 TGTTCTTCCGATTATACTGGAAAGGGTATTGATCAATTGGCCAATATACTAAAGACCCTG 35515 ||| | |||||| |||||| |||| ||||| || ||||| | | || | ||| | Sbjct 370031 TGTCATGACGATTACACTGGACAGGGAATTGACCAGTTGGC--AGAAGTTATAAACCGTA 370088 Query 35516 AGAGAA--AATCCAGATGATAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTC 35573 | || ||| | |||| || | || ||||||| ||||||||| ||||||| | | Sbjct 370089 TTAAAACCAATGCTACTGATCGACGTATTATTATGAGTGCATGGAATGTTATGGATATAC 370148 Query 35574 ACCTTATGGCTCTTCCTCCATGCCACATGACT-GCTCAATTTTATGTGGCTAATGGAGAA 35632 || ||||| || || || |||||| || | || ||||||| || || ||||||||| Sbjct 370149 CCCAAATGGCCCTCCCACCCTGCCAC-TGCTTGGCACAATTTTTCGTAGCAAATGGAGAA 370207 Query 35633 TTGTCGTGCCAGTTGTATCAGCGA--AGCGGAGATGTCGGGTTGGGCGTGCCCTTCAATA 35690 | || || ||||| ||||| ||| |||||| ||| || | || || || ||||| | Sbjct 370208 CTTTCTTGTCAGTTATATCAACGATCAGCGGACATG--GGTCTCGGAGTTCCATTCAACA 370265 Query 35691 TTGC 35694 |||| Sbjct 370266 TTGC 370269 >seq95 Length=6909593 Score = 95.1 bits (104), Expect = 2e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 94165 TTCACAAACTTGTTGACTGCGATAGAAGCCAAATTGCACACTGCAGTTTCCTCCGAATCA 94224 ||||| ||| |||| | |||||||| |||| |||||| || ||| |||| ||| Sbjct 5343422 TTCACGAACATGTTTAACGCGATAGACGCCAGATTGCAAACGGCAATTTCATCCTTTGAG 5343481 Query 94225 CTGTACTGGACAATTTCAGTGCACAAATTTGAAGACTTGATGATGCCGACATTTTCTTGG 94284 ||| | ||||| ||||||||||| || ||| |||||||| |||||| ||||| |||| Sbjct 5343482 GAGTATTCCACAATCTCAGTGCACAAGTTCGAACACTTGATGGTGCCGATATTTTGTTGG 5343541 Query 94285 TTAGACTTTCTATTG 94299 || ||||| |||| Sbjct 5343542 TTGCTCTTTCGATTG 5343556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989553126525425