Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq1902 95.1 1e-14 seq1662 91.5 1e-13 >seq1902 Length=3516739 Score = 95.1 bits (104), Expect = 1e-14 Identities = 174/253 (69%), Gaps = 4/253 (2%) Strand=Plus/Plus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||| ||||| ||||| | |||||||||| ||| | |||||| || || || || Sbjct 3494933 ATGTAAGTATCGATAAGCAGCGAATACATTTCACTGTGCACGTTTTCCATCGCAATTTGG 3494992 Query 13990 AAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCA 14047 || || || || || | || || ||||| || |||||| | || | ||| | | Sbjct 3494993 AACCCGTAGAAGCAACGCGCCTCGGTGACC--TGAACCTCCTGGCTGAACCGTTCGACGA 3495050 Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGT 14107 ||| || || ||||||||||| ||| || ||||| |||| | | || || | Sbjct 3495051 GGTTCTCGTTCACAATACCATCGGAAGCGGCGAAAAAGGCCAGCACATGGGAGATGAAAT 3495110 Query 14108 ATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCAT 14167 | |||| | ||||| |||| ||| ||||| | ||| ||||| ||||||||||| | Sbjct 3495111 GCTTCTCTCCGGACTTGAGCTTTTCCCAGTCGGCCAGATCTTTAGAGAGATCTACTTCTT 3495170 Query 14168 CAACTGTCCAAAA 14180 | || ||||| || Sbjct 3495171 CCACCGTCCAGAA 3495183 >seq1662 Length=3905379 Score = 91.5 bits (100), Expect = 1e-13 Identities = 173/253 (68%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 13930 ATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGA 13989 ||||| ||||| ||||| | |||||||||| ||| | |||||| || || || || Sbjct 1649958 ATGTAAGTATCGATAAGCAGCGAATACATTTCACTGTGCACGTTTTCCATCGCAATTTGG 1649899 Query 13990 AAACCATAAAAACATCTAGCTTC--TGACCATTGTACCTCCGAGTAAAATCTTTCTGCCA 14047 || || || || || | || || ||||| || |||||| | || | ||| | | Sbjct 1649898 AACCCGTAGAAGCAACGCGCCTCGGTGACC--TGAACCTCCTGGCTGAACCGTTCGACGA 1649841 Query 14048 AGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGT 14107 ||| || || ||||||||||| ||| || ||||| |||| | | || || | Sbjct 1649840 GGTTCTCGTTCACAATACCATCGGAAGCGGCGAAAAAGGCCAGCACATGGGAGATGAAAT 1649781 Query 14108 ATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCAT 14167 | |||| | ||||| |||| ||| ||||| | ||| || || ||||||||||| | Sbjct 1649780 GCTTCTCTCCGGACTTGAGCTTTTCCCAGTCGGCCAGATCTTTGGAGAGATCTACTTCTT 1649721 Query 14168 CAACTGTCCAAAA 14180 | || ||||| || Sbjct 1649720 CCACCGTCCAGAA 1649708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478574232953400