Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1930 96.9 3e-15 seq477 96.9 3e-15 >seq1930 Length=1715699 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||||||| || || || |||||||| || || | | | ||||| Sbjct 812143 AACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 812084 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||| ||| | ||||||||||| || || ||| |||||||| || || Sbjct 812083 CAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 812024 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| |||| |||||||| | ||| || || ||||| ||||| || Sbjct 812023 AATCTTAGCCTTGACATTTTCAATGGTATCCGAAGGTTCAACCTCCAAGGTGATGGTCTT 811964 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||| || || || || |||||| Sbjct 811963 GCCGGTCAAAGTCTTGACGAAGATCTGCATA 811933 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| ||||| ||||| || || || |||||||| || || | | | || || Sbjct 811687 AACCAAATGGAGGGTACTCTCCTTCTGGATGTTGTAGTCCGACAGGGTACGTCCATCCTC 811628 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||| ||| | ||||||||||| || || || || || || || || Sbjct 811627 CAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGATCCGGAGGGATGCCCTCCTTATCCTG 811568 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 || ||| ||| ||| |||| |||||||| ||| || || ||||| ||||| || Sbjct 811567 GATCTTGGCCTTCACATTTTCGATGGTATCCGAGGGTTCGACCTCCAAGGTGATGGTCTT 811508 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAA 15371 ||| || || |||||||| ||||| ||||| |||||| Sbjct 811507 ACCGGTTAGGGTTTTTACGAAAATCTGCATGGTTGAAA 811470 >seq477 Length=2976132 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||||||| || || || |||||||| || || | | | ||||| Sbjct 2305913 AACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 2305972 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||| ||| | ||||||||||| || || ||| |||||||| || || Sbjct 2305973 AAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 2306032 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| |||| |||||||| | ||| || || ||||| ||||| || Sbjct 2306033 AATCTTAGCCTTGACATTTTCAATGGTATCCGAAGGTTCAACCTCCAAGGTGATGGTCTT 2306092 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||| || || || || |||||| Sbjct 2306093 GCCGGTCAAAGTCTTGACGAAGATCTGCATA 2306123 Score = 93.3 bits (102), Expect = 3e-14 Identities = 147/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 15154 AACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTC 15213 ||| | |||||||||| || || || || ||||| || || | | | ||||| Sbjct 2305457 AACCAGATGAAGGGTGCTCTCCTTCTGGATATTGTAGTCCGACAGGGTGCGGCCATCTTC 2305516 Query 15214 TAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACA 15273 | || ||||| ||| | ||||||||||| || || ||| |||||||| || || Sbjct 2305517 AAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 2305576 Query 15274 AATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTT 15333 ||| || ||| ||| |||| |||||||| | ||| || || ||||| ||||| || Sbjct 2305577 AATCTTAGCCTTGACATTTTCAATGGTATCCGAAGGTTCAACCTCCAAGGTGATGGTCTT 2305636 Query 15334 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || |||| ||| || || || || |||||| Sbjct 2305637 GCCGGTCAAAGTCTTGACGAAGATCTGCATA 2305667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362168451766335