Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_005068.1 Length=110907 Score E Sequences producing significant alignments: (Bits) Value seq477 93.3 3e-14 >seq477 Length=2976132 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 43913 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATCGTCC 43972 |||| ||| || || ||||| || ||||| || || || || || |||| ||| Sbjct 2302950 ACCAGATGAAGAGTACTCTCCTTCTGAATGTTGTAGTCCGATAGGGTGCGGCCATCTTCC 2303009 Query 43973 AATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATCTGAA 44032 || || ||||| || || ||||| || ||||| || |||| | ||||||||||||| Sbjct 2303010 AACTGCTTTCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATACCTTCTTTATCTTGG 2303069 Query 44033 ATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGTTTTA 44092 || || ||||| | ||| ||||| | ||||| || || | || || || || Sbjct 2303070 ATCTTAGCCTTGACGTTTTCAATGGTATCCGAAGGCTCGACTTCCAAGGTGATGGTCTTG 2303129 Query 44093 CCGGTTAAAGTCTTCACAAATATTTGCAT 44121 ||||| || ||||| || || |||||||| Sbjct 2303130 CCGGTCAAGGTCTTGACGAAGATTTGCAT 2303158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354767071420380