Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq1183 91.5 1e-13 >seq1183 Length=7533919 Score = 91.5 bits (100), Expect = 1e-13 Identities = 179/263 (68%), Gaps = 4/263 (2%) Strand=Plus/Plus Query 5236 CGATCCGGTAGAACCGAATCCAGAGTCGCCGCGGTCGGTGTCGTCCAAGCGGTTAACCTC 5295 || ||| |||||||| || || | ||| || || || || ||| | ||||||| Sbjct 582852 CGTTCCAGTAGAACCAAAACCGCCGCTGCCTCGTTCCGTTTCCGTCAAACTACTAACCTC 582911 Query 5296 TTGAACTGCTGGGTGCGATATGCGTTCGCATATTAGCTGAGCTATCCTGTCTCCCTTCTT 5355 | | | |||| | || || ||||| || | ||| || || | || ||| Sbjct 582912 CTCCAGCTCCGGGTAAAAAATCCGCTCGCAGATAAACTGCGCAATGCGATCACCCCGGGC 582971 Query 5356 AACCTCAAAGTCGCTGTTTCCGAA--GTTAAACAGCACCACCCCGACATTGCCTCGGTAG 5413 |||| || ||| ||| ||||| ||| ||||||||||| || | |||||| |||||| Sbjct 582972 CACCTTGAATTCGTTGT--CCGAATGGTTGAACAGCACCACGCCCAGATTGCCACGGTAG 583029 Query 5414 TCTTCGTCGATAACGCCAGCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGT 5473 || || |||| ||||| |||||||| ||||| |||| || || || | ||||| || Sbjct 583030 TCCTCATCGACGACGCCGGCGCCCACATCGATGAAGTTCTTCACGGCCAATCCGGATCGG 583089 Query 5474 GGTGCTATGCGTCCGTAGCAACC 5496 || || | || ||||| || || Sbjct 583090 GGAGCAACACGCCCGTAACACCC 583112 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447736771597200