Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq1371 150 2e-31 seq1400 136 4e-27 seq175 131 2e-25 seq95 125 7e-24 seq458 82.4 7e-11 >seq1371 Length=8723579 Score = 150 bits (166), Expect = 2e-31 Identities = 222/312 (71%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 71660 GAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAG 71719 ||||| || ||| ||||| || |||||||| | || ||| || | ||| || Sbjct 8603804 GAGCAAGCTCGAACCCATGACGATCTATGGAACTCGGCGCAGATCCAAATGGTCAAAGAA 8603745 Query 71720 GGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAA 71779 || ||||| ||||| | ||| |||||||||||||| || |||||||||||||||||| || Sbjct 8603744 GGCAAAATGCACGGTTTCCTTCGCATGTACTGGGCGAAGAAGATTCTCGAGTGGACTAAA 8603685 Query 71780 ACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGT 71839 ||||| ||| | || || ||| | ||||| || |||||| | ||| || ||||| Sbjct 8603684 ACTCCGGAGGAAGCCCTGGAGACGGCGATTTACCTCAACGATCGCTACCAGCTGGACGGC 8603625 Query 71840 CGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTC-TTCACGATAGAAG 71898 || || || || || || || || ||||||||| || |||||| | | || || | Sbjct 8603624 CGAGACCCAAATGGATACGTTGGCTGCATGTGGTCCA-TTGCGGGCATCCATGACCAGGG 8603566 Query 71899 CTTTTTAGAACGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACG 71958 || ||||| ||||||| || ||||| ||||| ||||| | | || || | || Sbjct 8603565 CTGGCGTGAACGGGAAGTGTTCGGAAAAATCCGCTACATGAACTATGAAGGATGTAAGCG 8603506 Query 71959 CAAGTTCAATGT 71970 |||||| |||| Sbjct 8603505 GAAGTTCGATGT 8603494 >seq1400 Length=7880666 Score = 136 bits (150), Expect = 4e-27 Identities = 216/307 (70%), Gaps = 2/307 (1%) Strand=Plus/Plus Query 71660 GAGCATAATCAAACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAG 71719 ||||| || ||| ||||| || |||||||| | || ||| || | ||| || Sbjct 4958634 GAGCAAGCTCGAACCCATGACGATCTATGGAACTCGGCGCAGATCCAAATGGTCAAGGAA 4958693 Query 71720 GGTAAAATTCACGGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGGACTCAA 71779 || ||||| ||||| | ||| |||||||||||||| || ||||||||||||||||| || Sbjct 4958694 GGCAAAATGCACGGTTTCCTTCGCATGTACTGGGCGAAGAAGATTCTCGAGTGGACAAAA 4958753 Query 71780 ACTCCCGAGCAGGCGCTCGAGTATTCTATTTATCTAAACGATAGATACAGTCTCGACGGT 71839 ||||| ||| | || || ||| | || || || |||||| | ||| || ||||| Sbjct 4958754 ACTCCGGAGGAAGCTCTGGAGACGGCGATCTACCTCAACGATCGCTACCAGCTGGACGGC 4958813 Query 71840 CGCGATCCTAACGGTTATGTCGGTTGCATGTGGAGCATTTGCGGTC-TTCACGATAGAAG 71898 || || || || || || || || ||||||||| || |||||| | | ||||| | Sbjct 4958814 CGAGACCCAAATGGATACGTTGGCTGCATGTGGTCCA-TTGCGGGCATCCACGACCAGGG 4958872 Query 71899 CTTTTTAGAACGTCAAGTGTTTGGTAAAATTCGCTATATGAATCGTAATGGTTGCGAACG 71958 || || || ||||||| || || || ||||| ||||| | | || ||| | || Sbjct 4958873 CTGGCGTGAGCGGGAAGTGTTCGGAAAGATCCGCTACATGAACTATGAAGGATGCAAGCG 4958932 Query 71959 CAAGTTC 71965 |||||| Sbjct 4958933 GAAGTTC 4958939 >seq175 Length=5193165 Score = 131 bits (144), Expect = 2e-25 Identities = 329/490 (67%), Gaps = 19/490 (4%) Strand=Plus/Minus Query 147471 TCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGTTG 147530 || || ||||| |||| ||| ||| | || ||| |||| || || ||||||||| Sbjct 3013836 TCACCGGACAGTACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCAAAGGACTCGTTG 3013777 Query 147531 TTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGCGT 147590 || || ||||| ||||| |||| ||||||||||| || | | | |||||||| Sbjct 3013776 TTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATAGGCGCCAAAAGAAGCGAATTGCGA 3013717 Query 147591 AAGCCGTGCATAGCCAT-TTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATTG 147649 | ||||| | || || || || |||| || |||||| ||| ||||| | | || Sbjct 3013716 ACTCCGTGTTTGGCGATCTTATCTTTTAA-AGCGGCCCAGTCCCACAGATCTGTGGGTTC 3013658 Query 147650 GTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAGA 147709 | | ||||||| ||| |||||| || ||| || | |||| ||| | |||| Sbjct 3013657 CT---TGTTCCACATGTCATACTGTAGAATTCCTTTGCTGACCGGGCAACCAGCATAAGT 3013601 Query 147710 ATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACTT--AGTGCACCATAATAA 147767 |||||||| || | || || |||||| | || ||| || |||||||| || Sbjct 3013600 TTCGTATGTGCCTTCTTTTTCCGCCAGTTCGCAGC--TGGCTTCAAGGGCACCATAGTAG 3013543 Query 147768 ATAGTTTCTGAAATCTTTTTATTTAAATCTCT-AGCCTCTTGGCTGTCGTAGGGCATATC 147826 || || || |||||| || |||| | ||| || |||| ||||||||| || ||| | Sbjct 3013542 ATTGTCTCGAAAATCTGTTGGTTTAGCT-TCTGGGCTTCTTCGCTGTCGTAAGG-ATAAC 3013485 Query 147827 ----CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTC 147882 || ||| ||||| ||| || | ||| || | || || || || || ||||| | Sbjct 3013484 GCATCAGAAT---GAACGCATCGGCCATTCCCTGGACGCCAATTCCAATCGGGCGGTGGC 3013428 Query 147883 TGAAATTCGATGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGA 147942 | || || || || | || |||||| ||||| | |||||| ||||| |||| Sbjct 3013427 GCATGTTGGACCGTTTGGCCTCCGGCACCGGATAGAAATTGATGTCGATGATTTTGTTGA 3013368 Query 147943 GATTATTGGT 147952 |||| ||||| Sbjct 3013367 GATTCTTGGT 3013358 >seq95 Length=6909593 Score = 125 bits (138), Expect = 7e-24 Identities = 330/490 (67%), Gaps = 19/490 (4%) Strand=Plus/Plus Query 147471 TCGCCCGACAGAACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGACTCGTTG 147530 || || ||||| |||| ||| ||| | || ||| |||| || || ||||||||| Sbjct 5342891 TCACCGGACAGTACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCAAAGGACTCGTTG 5342950 Query 147531 TTACCTAGAATCTGTGCAGTCGTTGCCGTCGGCATGTAAGCAATCAATAATGAATTGCGT 147590 || || ||||| ||||| |||| ||||||||||| || | | | |||||||| Sbjct 5342951 TTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATAGGCGCCAAAAGCAGCGAATTGCGA 5343010 Query 147591 AAGCCGTGCATAGCCAT-TTCTCGCTTAAGCTCGTCCCAGTTCCAAAGATCATTCGATTG 147649 | ||||| | || || || || |||| || |||||| ||| | ||| | | || Sbjct 5343011 ACTCCGTGTTTGGCGATCTTATCTTTTAA-AGCGGCCCAGTCCCACAAATCTGTGGGTTC 5343069 Query 147650 GTTAATATTCCACAAATCAAACTGTAAAAGTCCACAACTTGCAGGGCTTCCATCGTAAGA 147709 | ||||||||| ||| |||||| || || || | |||| ||| | |||| Sbjct 5343070 CT---TATTCCACATGTCATACTGTAGAATCCCTTTGCTGACCGGGCAACCAGCATAAGT 5343126 Query 147710 ATCGTATGTTCCGTGCAGTTTAGCTAGTTCGATACTTTGACT-TAGTGCACCATAATAAA 147768 |||||||| || | || || |||||| | | | || || |||||||| || | Sbjct 5343127 TTCGTATGTGCCTTCTTTTTCCGCCAGTTCG-CAGCTGGCCTCAAGGGCACCATAGTAGA 5343185 Query 147769 TAGTTTCTGAAATCTTTTTATTTAAATCTCT-AGCCTCTTGGCTGTCGTAGGGCATATC- 147826 | || || |||||| || |||| | ||| || |||| ||||||||| || ||| | Sbjct 5343186 TTGTCTCGAAAATCTGTTGGTTTAGCT-TCTGGGCTTCTTCGCTGTCGTAAGG-ATAACG 5343243 Query 147827 ---CAAAATGGCGAACGTATCCGCAAGTCCTTGAATACCGATACCGATGGGTCGGTGTCT 147883 || ||| ||||| ||| || | ||| || | || || || || || ||||| | Sbjct 5343244 CATCAGAAT---GAACGCATCGGCCATTCCCTGGACGCCAATTCCAATCGGGCGGTGACG 5343300 Query 147884 GAAATTCGA-TGCTTGAGCGCTAGCCAACGGATAAAAATTCAAGTCGATAATTTTATTGA 147942 | || || ||||| || | || |||||| ||||| | |||||| ||||| |||| Sbjct 5343301 CATGTTGGACCGCTTG-GCCTCCGGCACCGGATAGAAATTGATGTCGATGATTTTGTTGA 5343359 Query 147943 GATTATTGGT 147952 |||| ||||| Sbjct 5343360 GATTCTTGGT 5343369 >seq458 Length=1678131 Score = 82.4 bits (90), Expect = 7e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||||||||||| | || || ||||| || || ||||| || || || ||||| Sbjct 1200547 GACACCATCGAGAACGTTAAGGCCAAGATCCAGGATAAGGAAGGTATCCCGCCAGATCAG 1200606 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || ||| || || || ||||||| | ||| | |||||||||| Sbjct 1200607 CAGCGTCTCATCTTCGCCGGTAAGCAGCTGGAAGATGGTCGAACTCTGTCCGACTATAAC 1200666 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 || || || ||||| || ||||||||||| || Sbjct 1200667 ATCCAGAAGGAATCCACCCTCCATCTGGTCTTG 1200699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478647830713200