Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq95 181 3e-40 seq1144 100 7e-16 >seq95 Length=6909593 Score = 181 bits (200), Expect = 3e-40 Identities = 705/1092 (65%), Gaps = 17/1092 (2%) Strand=Plus/Minus Query 363391 TTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGAA 363450 ||||| | || ||| |||||| ||||| | | ||||| ||| | || || ||| Sbjct 5344353 TTCGGCTTCAAAACGTTGGAGAGGTCCTATTTGCTTAAGATCAAGGGTAAGATCGTGGAA 5344294 Query 363451 CGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCC 363510 || || ||||| ||||| ||||| || || || ||||| || | || | || || Sbjct 5344293 CGTCCCCAGCACATGTTGATGCGCGTGGCCATCGGTATTCACGGGGAAGACATCGACGCG 5344234 Query 363511 GCGATTGAAACATATAAGCTTCTAAGTGCTCGTG-TA-TTCACGCACGCCACGCCAACAA 363568 || ||||| |||||||| | || || | | || ||||| ||||| |||| || | Sbjct 5344233 GCCATTGAGACATATAACTTGCT--GTCGGAGAGATACTTCACTCACGCTTCGCCTACCA 5344176 Query 363569 TGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGG 363628 ||| || | ||| ||| |||||| | || || ||||| || | | |||| | Sbjct 5344175 TGTTTGCGGCCGCAACGTGTAGGCCACAGTTATCGTCCTGCTTCCTGTTGACCATGAGCG 5344116 Query 363629 ACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATG 363688 ||||| ||| ||||| |||| || || | || | ||||| | |||||||| | Sbjct 5344115 ACGATAGCATTGAGGGCATCTACGATACGTTGAAACAGTGTGCGTTGATTTCCAAATCCG 5344056 Query 363689 CAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGC 363747 | ||||| |||||| | | ||| | || || | || | | |||||| ||| Sbjct 5344055 CCGGCGGTATTGGTTTGAATGTGCACTGCATCCGAGCCAAAGGA-ACCTACATTGCCGGA 5343997 Query 363748 AC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAG 363806 || | || || ||| || || || |||| ||| | | |||| | ||||| || | Sbjct 5343996 ACTAACGGCAT-CTCCAACGGATTGATTCCGATGTTGAGGGTGTACAATAATACGGCTAA 5343938 Query 363807 GTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCA 363866 |||||| || ||||| || ||| | || || ||||| || ||||||||||| Sbjct 5343937 GTACGTGGATCAGGGAGGCAACAAGAGGCCTGGTGCATTTGCCATCTATCTCGAGCCGTG 5343878 Query 363867 TCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCG 363926 |||| ||| | || ||||| || || | || ||||| || || || | || Sbjct 5343877 GCATGGAGATGTGTTCGAGTTCCTGGATTTGAAAAAGAACACAGGCGCGGAAGATGTCCG 5343818 Query 363927 TGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGG-AGG 363985 || | || ||||||| || || ||| || | || | || ||||| || |||| || Sbjct 5343817 AGCTAGGGACATGTTCTACGCGCTGTGGATTCCGGATCTGTTCATGAAACGAGTGGAAGC 5343758 Query 363986 CAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGG 364045 || ||| | |||| | | ||||| || |||||||| || | || ||| |||| Sbjct 5343757 CAACGAAG-ACTGGTGCTTGATGTGCCCGCATGAATGTCCTGGCTTATCGGATACGTGGG 5343699 Query 364046 GTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAA 364105 | ||||| | || | ||| | || ||| |||| || | || || | | ||| Sbjct 5343698 GCGACGAATTTGAAAAATTGTACACATCCTACGAAGCGGAAGG-ACGGTTCATCCG-CAA 5343641 Query 364106 --TTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACC 364163 | || ||| | | |||||||| || || || || || |||| || ||| || Sbjct 5343640 GGTGAAAGCCCAGGATTTGTGGTTTGCGATTATTGAGTCTCAAGTTGAAACCGGAGTTCC 5343581 Query 364164 CTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAAT 364223 || ||| | |||||||| | ||||| || ||| |||||| || | | || || || Sbjct 5343580 ATACATGCTCTACAAAGACGCTTGCAATCGAAAGAGCAACCAACAAAATATCGGCACCAT 5343521 Query 364224 TCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 || ||| | || || |||||| | |||||| || | || || | |||||| Sbjct 5343520 CAAGTGTTCGAACTTGTGCACTGAGATTGTGGAATACTCCTCAAAGGATGAAATTGCCGT 5343461 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAA---GATGGTACTTTTGACCA 364340 || || || ||||| |||||| | ||| || ||| || || | ||| Sbjct 5343460 TTGCAATCTGGCGTCTATCGCGTTAAACATGTTCGTGAAACCCGACAAGACATACGACTT 5343401 Query 364341 CCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAA 364400 |||| | | | || ||| || | ||| || |||||| |||| | ||||||| Sbjct 5343400 CCAGAAATTGAAAGAAGTATCCAAAACTGCCACCAAGAATCTCAACAAAATCATCGACAT 5343341 Query 364401 GAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCT 364460 |||| ||||| | || || ||| |||| || || |||||||| ||||||||||| | Sbjct 5343340 CAATTTCTATCCGGTGCCGGAGGCCAAGCGGTCCAACATGCGTCACCGCCCGATTGGAAT 5343281 Query 364461 TGGTGTACAGGG 364472 ||| || ||||| Sbjct 5343280 TGGCGTCCAGGG 5343269 >seq1144 Length=440944 Score = 100 bits (110), Expect = 7e-16 Identities = 214/312 (69%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 111488 AGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTACAAAAC 111547 ||||||||| || || || |||||||| |||||||| ||||| || || | || ||||| Sbjct 369970 AGGTGATCTAGGGCCGGTATACGGATTCCAATGGCGTCACTTCGGCGCCAAATATAAAAC 370029 Query 111548 CATGCACGACTCATATGATTCACAGGGAACTGATCAATTA-CAGAATGTCATTGATCAAA 111606 || ||| || | |||||||| ||| || || ||||| || || | | | Sbjct 370030 GTGTCATGACGATTACACTGGACAGGGAATTGACCAGTTGGCAGAA-GTTATAAACCGTA 370088 Query 111607 TTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGCAT-TG 111665 |||| | ||| | ||| ||| || |||||||||||||||||||| ||| || | Sbjct 370089 TTAAAACCAATGCTACTGATCGACGTATTATTATGAGTGCATGGAA-TGTTATGGATATA 370147 Query 111666 GAAAAAATGGCACTTCCACCATGTCATCTTATGTGC-CAGTTTTATGTACACGACGGGAT 111724 ||||||| || ||||| || || || | || || |||| ||| | || Sbjct 370148 CCCCAAATGGCCCTCCCACCCTGCCA-CTGCTTGGCACAATTTTTCGTAGCAAATGGAGA 370206 Query 111725 GCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATAT 111784 ||||| || || | ||||| ||||| || || || ||||| || ||||| || || || Sbjct 370207 ACTTTCTTGTCAGTTATATCAACGATCAGCGGACATGGGTCTCGGAGTTCCATTCAACAT 370266 Query 111785 TGCAAGTTACGC 111796 ||| || || || Sbjct 370267 TGCTAGCTATGC 370278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303312937404170