Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq40 102 7e-17 seq458 98.7 9e-16 seq175 91.5 1e-13 seq95 91.5 1e-13 >seq40 Length=5052132 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || ||||| || | || || || | || || | || |||||| || Sbjct 2143849 ATGCAGATCTTCGTAAAGACGCTGACCGGCAAGACCATCACTCTGGAGGTCGAGCCCTCG 2143908 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || ||||| || || Sbjct 2143909 GACACCATCGAAAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAG 2143968 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||| ||||| |||||||||| | | | | | |||||| ||| Sbjct 2143969 CAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCCGTACCCTATCCGATTACAAC 2144028 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || ||||| |||| || || Sbjct 2144029 ATTCAAAAGGAGTCTACCCTTCACTTGGT 2144057 >seq458 Length=1678131 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || || || || || || || | || || | || |||||| || Sbjct 1200943 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACTCTGGAGGTCGAGCCCTCG 1201002 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| ||||| ||||| ||||| || || || || || Sbjct 1201003 GACACCATCGAAAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCCCCAGACCAG 1201062 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | ||||| | || ||| ||||| |||||||||| | | | | | |||||| ||| Sbjct 1201063 CAGCGTCTGATCTTCGCCGGTAAGCAGCTCGAAGATGGCCGTACCCTATCCGATTACAAC 1201122 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGT 24199 |||||||| || ||||| |||| || || Sbjct 1201123 ATTCAAAAGGAGTCTACCCTTCACTTGGT 1201151 >seq175 Length=5193165 Score = 91.5 bits (100), Expect = 1e-13 Identities = 321/492 (65%), Gaps = 11/492 (2%) Strand=Plus/Minus Query 132219 ATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGATTCGT 132278 ||||||| || | |||| ||| ||| | || ||| |||| || || || |||| Sbjct 3013838 ATTCACCGGACAGTACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCAAAGGACTCGT 3013779 Query 132279 TGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCAT-GTAGGCAATCAATAA-TGAATT 132336 |||| || | ||||| || |||| ||||||||||| | | ||| || || ||||| Sbjct 3013778 TGTTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATAGGCGCCAA--AAGAAGCGAATT 3013721 Query 132337 GCGCAGCCCGTGTATGGCCAT-TTGCCGTTTAAGCTCGTCCCAGTTCCACAGATCATTCG 132395 ||| | |||||| |||| || || | ||||| || |||||| ||||||||| | | Sbjct 3013720 GCGAACTCCGTGTTTGGCGATCTTATCTTTTAA-AGCGGCCCAGTCCCACAGATCTGTGG 3013662 Query 132396 ATTGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTACTTGCAGGAGATCCGTTAT 132455 || | ||||||| ||| |||||| | || | || | || | || || Sbjct 3013661 GTT---CCTTGTTCCACATGTCATACTGTAGAATTCCTTTGCTGACCGGGCAACCAGCAT 3013605 Query 132456 AAGAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTGACTC-AGGGCACCATAA 132514 ||| ||||||| || | | || || ||||| ||| | || ||||||||||| Sbjct 3013604 AAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCGCAGCT-GGCTTCAAGGGCACCATAG 3013546 Query 132515 TAAATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTGTTGACTGTCGTAGGGCAAA 132574 || || ||||| | || | | || | | | |||| || |||||||| || || Sbjct 3013545 TAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGGGCTTCTTCGCTGTCGTAAGGATAA 3013486 Query 132575 TTTAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATGGGTCTATGTTTA 132634 | | | |||||||||||| | |||||| | ||| || || || || | || Sbjct 3013485 CGCATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATTCCAATCGGGCGGTGGCGC 3013426 Query 132635 AAATTCGATACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTGTCTATTATTTTATTGAGA 132694 | || || || || | || |||||| || || |||| || ||||| |||||| Sbjct 3013425 ATGTTGGACCGTTTGGCCTCCGGCACCGGATAGAAATTGATGTCGATGATTTTGTTGAGA 3013366 Query 132695 TTGTTAGTGACA 132706 || || ||| || Sbjct 3013365 TTCTTGGTGGCA 3013354 >seq95 Length=6909593 Score = 91.5 bits (100), Expect = 1e-13 Identities = 320/491 (65%), Gaps = 9/491 (2%) Strand=Plus/Plus Query 132219 ATTCACCCGATAAGACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGATTCGT 132278 ||||||| || | |||| ||| ||| | || ||| |||| || || || |||| Sbjct 5342889 ATTCACCGGACAGTACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCAAAGGACTCGT 5342948 Query 132279 TGTTTCCCAATATTTGAGCTGTCGTTGCCGTCGGCATGTAGGCAATCAATAATGAATTGC 132338 |||| || | ||||| || |||| ||||||||||| || | | | ||||||| Sbjct 5342949 TGTTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATAGGCGCCAAAAGCAGCGAATTGC 5343008 Query 132339 GCAGCCCGTGTATGGCCAT-TTGCCGTTTAAGCTCGTCCCAGTTCCACAGATCATTCGAT 132397 | | |||||| |||| || || | ||||| || |||||| ||||| ||| | | | Sbjct 5343009 GAACTCCGTGTTTGGCGATCTTATCTTTTAA-AGCGGCCCAGTCCCACAAATCTGTGGGT 5343067 Query 132398 TGAGAGATATTCCACAAATCAAACTGTAAATGACCGCTACTTGCAGGAGATCCGTTATAA 132457 | ||||||||| ||| |||||| | || | || | || | || |||| Sbjct 5343068 T---CCTTATTCCACATGTCATACTGTAGAATCCCTTTGCTGACCGGGCAACCAGCATAA 5343124 Query 132458 GAATCGTATGCTCCGTGTAATTTGGCAAGTTCTATGCTCTGACTC-AGGGCACCATAATA 132516 | ||||||| || | | || || ||||| ||| | ||| ||||||||||| || Sbjct 5343125 GTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCGCAGCT-GGCCTCAAGGGCACCATAGTA 5343183 Query 132517 AATAGTCTCTGAGATTTTTCTATTCAATTCCCTTGCTTGTTGACTGTCGTAGGGCAAATT 132576 || ||||| | || | | || | | | |||| || |||||||| || || Sbjct 5343184 GATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGGGCTTCTTCGCTGTCGTAAGGATAACG 5343243 Query 132577 TAAAATAGCGAACGCATCGGCAAGTCCCTGAATGCCGATACCGATGGGTCTATGTTTAAA 132636 | | | |||||||||||| | |||||| | ||| || || || || | || | Sbjct 5343244 CATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATTCCAATCGGGCGGTGACGCAT 5343303 Query 132637 ATTCGA-TACTTGTGCGCTAGTCAGCGGATAAAAGTTTTTGTCTATTATTTTATTGAGAT 132695 || || |||| || | || |||||| || || |||| || ||||| ||||||| Sbjct 5343304 GTTGGACCGCTTG-GCCTCCGGCACCGGATAGAAATTGATGTCGATGATTTTGTTGAGAT 5343362 Query 132696 TGTTAGTGACA 132706 | || ||| || Sbjct 5343363 TCTTGGTGGCA 5343373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429923240977425