Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq458 122 8e-23 seq40 107 2e-18 seq477 95.1 1e-14 seq1930 86.0 5e-12 >seq458 Length=1678131 Score = 122 bits (134), Expect = 8e-23 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| || ||||||| | || || ||| | || Sbjct 1200031 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAGACCATCACTCTTGAGGTCGAGCCTTCG 1200090 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| ||||| || ||| ||||| ||||| || || || ||||| Sbjct 1200091 GACACTATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAAGGTATCCCTCCAGACCAG 1200150 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| ||||| || || | || || | ||| ||| || ||| |||||| Sbjct 1200151 CAGCGTCTGATTTTCGCCGGTAAGCAGCTCGAGGACGGTCGTACTCTGTCCGACTACAAT 1200210 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||| || |||||| | || || Sbjct 1200211 ATCCAGAAGGAATCTACCCTACATCTGGTCCT 1200242 Score = 102 bits (112), Expect = 7e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | ||||| ||| | || Sbjct 1199575 ATGCAGATCTTCGTGAAGACCTTGACTGGCAAGACCATCACTTTGGAAGTCGAGCCTTCG 1199634 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| ||||| || || || || || Sbjct 1199635 GACACCATCGAGAACGTCAAGGCCAAGATCCAAGACAAGGAAGGTATCCCGCCAGATCAG 1199694 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | ||||| | ||| ||| || ||||||||| Sbjct 1199695 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAAGACGGTCGTACTCTGTCGGATTACAAT 1199754 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || || ||||| || ||| Sbjct 1199755 ATCCAGAAGGAGTCCACCCTGCAT 1199778 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||||||||| ||||||| | || || ||| | || Sbjct 1199803 ATGCAGATCTTCGTGAAGACATTGACCGGTAAGACCATCACTCTTGAGGTCGAGCCTTCG 1199862 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| || || || || || || ||| Sbjct 1199863 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAGGGTATCCCGCCAGATCAA 1199922 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| || ||| || ||| |||||| Sbjct 1199923 CAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACTCTGTCCGACTACAAT 1199982 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || |||||| | || || Sbjct 1199983 ATCCAGAAGGAGTCTACCCTACATCTGGTCCT 1200014 >seq40 Length=5052132 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| |||||||| ||| ||||||| | || || || | || Sbjct 2143165 ATGCAGATCTTCGTGAAGACCTTGACCGGCAAAACCATCACTCTTGAGGTCGAACCTTCG 2143224 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| ||||| || || || || ||| Sbjct 2143225 GACACCATCGAGAACGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCAGATCAA 2143284 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || || || || | || |||| || ||| || |||||||||| Sbjct 2143285 CAGCGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACTCTGTCCGATTACAAT 2143344 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || |||||||| || ||| | || || Sbjct 2143345 ATCCAGAAGGAATCCACTCTTCATCTGGTCCT 2143376 Score = 98.7 bits (108), Expect = 9e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| || || ||||||| | || || ||| | ||| Sbjct 2142937 ATGCAGATCTTCGTGAAGACCTTGACGGGCAAGACCATCACTTTGGAGGTCGAGCCTTCT 2142996 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| ||||| || || || || || Sbjct 2142997 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGAAGGTATCCCGCCAGATCAG 2143056 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || ||||| || || | || || | || ||| || ||||||||| Sbjct 2143057 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGTACTCTGTCGGATTACAAT 2143116 Query 25179 ATTCAAAAAGAATCCACGCTACAT 25202 || || || |||||||| || ||| Sbjct 2143117 ATCCAGAAGGAATCCACCCTCCAT 2143140 >seq477 Length=2976132 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || |||||||||||||| || |||| || | || || || | | Sbjct 2308400 ATGCAGATCTTCGTGAAGACTTTGACCGGAAAGACCATTACCCTGGATGTCGAAGCTGTT 2308341 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||| || | ||| |||||| || || ||||| || ||||| |||||| Sbjct 2308340 GACACCATCCAGAACATCAAGGGCAAAATCGAGGATAAGGAAGGTATCCCACCAGACCAA 2308281 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || ||||| || | ||||||| || | || ||| |||||| Sbjct 2308280 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTGCCCTGTCCGACTACAAT 2308221 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || || | ||| || || || || |||||| | || |||| || Sbjct 2308220 GTCCAGAAGGGATCTACCCTGCACTTGGTGCTACGCCTCCGAGGTGG 2308174 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||||||||| ||||||| | || || || | || Sbjct 2303387 AATGCAGATTTTCGTCAAGACCCTGACCGGTAAAACCATCACCTTGGAGGTCGAACCCTC 2303328 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || ||| ||||| || ||| || || ||||| || || || || || Sbjct 2303327 GGATACCATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCTCCAGATCA 2303268 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || ||||| || || | ||||||| ||||| || || ||||| Sbjct 2303267 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTACAA 2303208 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||| ||| || ||| | || || Sbjct 2303207 CATCCAGAAGGAAAGCACTCTTCATCTGGTCCT 2303175 >seq1930 Length=1715699 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || ||||||||||| || |||| || | || || || | | Sbjct 809468 ATGCAGATCTTCGTGAAAACTTTGACCGGAAAGACCATTACCCTGGATGTCGAAGCTGTT 809527 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||| || | ||| |||||| || || ||||| || ||||| ||||| Sbjct 809528 GACACCATCCAGAACATCAAGGGCAAAATCGAGGATAAGGAAGGTATCCCACCAGACCAG 809587 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || || ||||| || | ||||||| || | || ||| |||||| Sbjct 809588 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGCCGTGCCCTGTCCGACTACAAT 809647 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || || | ||| || || || || |||||| | || |||| || Sbjct 809648 GTCCAGAAGGGATCTACCCTGCACTTGGTGCTACGCCTCCGAGGTGG 809694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433315140314525