Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1902 212 7e-50 seq1662 206 3e-48 seq1743 111 2e-19 seq938 111 2e-19 seq322 111 2e-19 seq306 111 2e-19 seq1654 109 6e-19 seq1616 89.7 6e-13 >seq1902 Length=3516739 Score = 212 bits (234), Expect = 7e-50 Identities = 309/437 (71%), Gaps = 0/437 (0%) Strand=Plus/Plus Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 ||||||| || | |||||| || || ||||| |||||||| ||||||| || || || Sbjct 3490116 CAACTCGAGCAGCAGTCTATCGGCCACGAATTCGATGTACTGCGACATCAGTTCGCAGTT 3490175 Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGC 93027 ||| || || | | || || || || | |||||||| || | ||| || | || || Sbjct 3490176 CATGCCAAGCAAATCAACCGGAAGGGCTTTCGTCAAGAACTCCTGCTCAATCAGCACTGC 3490235 Query 93028 TTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACAT 93087 ||| | |||||| || || | | | ||||| || || | ||| ||| |||| Sbjct 3490236 TTCCCGGATGATTTCAATCACACGTTCCTGCGACGGTTTCTGAACCAGATATTTGAACAT 3490295 Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147 | ||| |||||||| || |||| || ||||| || || |||| ||| ||| ||| || Sbjct 3490296 AAGGCAAGCAAAGTCCGTGTGTAGGCCCTCGTCACGGGAGATCAGCTCGTTGGAGAAAGT 3490355 Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207 | || || | ||| || || ||||||||||||||||| || ||||| ||||| || Sbjct 3490356 AAGGCCGGGCATCAGGCCGCGCTTCTTGAGCCAAAATATGGACGCAAAGCTACCGCTGAA 3490415 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267 || || ||||||||||| ||||| || || | || || ||||||| || ||||| Sbjct 3490416 GAAGATGCCTTCCACGGCGGCAAAGGCGACCACGCGCTCTCCAAAATTAGCCTGCTTACT 3490475 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| || | ||||| || ||||| ||||| | ||| ||||| | ||||| || Sbjct 3490476 GGAGATCCAGTTCAGCGCCCAGTCTGCTTTCTTCTTCACACAGGGTAGATTATCGATGGC 3490535 Query 93328 GTTAAATAGGTAATCTC 93344 || || | ||| |||| Sbjct 3490536 ATTGAACAAGTATTCTC 3490552 Score = 185 bits (204), Expect = 1e-41 Identities = 204/272 (75%), Gaps = 0/272 (0%) Strand=Plus/Plus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||||||||||| |||||||| | ||| |||||||||||| || || || ||||| Sbjct 3494924 GAATCTCGTATGTAAGTATCGATAAGCAGCGAATACATTTCACTGTGCACGTTTTCCATC 3494983 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||||||||| |||||||| || | || || |||| ||| || || || || | Sbjct 3494984 GCAATTTGGAACCCGTAGAAGCAACGCGCCTCGGTGACCTGAACCTCCTGGCTGAACCGT 3495043 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || ||||| || || || || ||||||||||| || || ||||| |||| | ||| Sbjct 3495044 TCGACGAGGTTCTCGTTCACAATACCATCGGAAGCGGCGAAAAAGGCCAGCACATGGGAG 3495103 Query 93533 ATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCG 93592 || ||||| ||||| | || ||||| ||||| |||| |||||||| || ||||| Sbjct 3495104 ATGAAATGCTTCTCTCCGGACTTGAGCTTTTCCCAGTCGGCCAGATCTTTAGAGAGATCT 3495163 Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 |||||||| || ||||| || ||||| || || Sbjct 3495164 ACTTCTTCCACCGTCCAGAAGGATGCCTCGGC 3495195 >seq1662 Length=3905379 Score = 206 bits (228), Expect = 3e-48 Identities = 308/437 (70%), Gaps = 0/437 (0%) Strand=Plus/Minus Query 92908 CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATT 92967 ||||||| || | |||||| || || ||||| |||||||| ||||||| || || || Sbjct 1651956 CAACTCGAGCAGCAGTCTATCGGCCACGAATTCGATGTACTGCGACATCAGTTCGCAGTT 1651897 Query 92968 CATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGC 93027 ||| || || | | || || || || | |||||||| || | ||| || | || || Sbjct 1651896 CATGCCAAGCAAATCAACCGGAAGGGCTTTCGTCAAGAACTCCTGCTCAATCAGCACTGC 1651837 Query 93028 TTCTTTCAAGATTTCTATTACTCTACTATTTGGTGGTTTTTGTACGACATAATTGTACAT 93087 ||| | |||||| || || | | | ||||| || || | ||| ||| |||| Sbjct 1651836 TTCCCGGATGATTTCAATCACACGTTCCTGCGACGGTTTCTGAACCAGATATTTGAACAT 1651777 Query 93088 TAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGT 93147 | ||| |||||||| || |||| || ||||| || || |||| ||| ||| ||| || Sbjct 1651776 AAGGCAAGCAAAGTCCGTGTGTAGGCCCTCGTCACGGGAGATCAGCTCGTTGGAGAAAGT 1651717 Query 93148 TAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaa 93207 | || || | ||| || || ||||||||||||||||| || ||||| ||||| || Sbjct 1651716 AAGGCCGGGCATCAGGCCGCGCTTCTTGAGCCAAAATATGGACGCAAAGCTACCGCTGAA 1651657 Query 93208 aaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACT 93267 || || ||||||||||| || || || || | || || ||||||| || ||||| Sbjct 1651656 GAAGATGCCTTCCACGGCGGCGAAGGCGACCACGCGCTCTCCAAAATTAGCCTGCTTACT 1651597 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 | |||||| || | ||||| || ||||| ||||| | ||| ||||| | ||||| || Sbjct 1651596 GGAGATCCAGTTCAGCGCCCAGTCTGCTTTCTTCTTCACACAGGGTAGATTATCGATGGC 1651537 Query 93328 GTTAAATAGGTAATCTC 93344 || || | ||| |||| Sbjct 1651536 ATTGAACAAGTATTCTC 1651520 Score = 188 bits (208), Expect = 8e-43 Identities = 205/272 (75%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 93353 GAATCTCGTATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATT 93412 |||||||||||||| |||||||| | ||| |||||||||||| || || || ||||| Sbjct 1649967 GAATCTCGTATGTAAGTATCGATAAGCAGCGAATACATTTCACTGTGCACGTTTTCCATC 1649908 Query 93413 GCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTC 93472 ||||||||||| |||||||| || | || || |||| ||| || || || || | Sbjct 1649907 GCAATTTGGAACCCGTAGAAGCAACGCGCCTCGGTGACCTGAACCTCCTGGCTGAACCGT 1649848 Query 93473 TCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTT 93532 || ||||| || || || || ||||||||||| || || ||||| |||| | ||| Sbjct 1649847 TCGACGAGGTTCTCGTTCACAATACCATCGGAAGCGGCGAAAAAGGCCAGCACATGGGAG 1649788 Query 93533 ATAAAATGTTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCG 93592 || ||||| ||||| | || ||||| ||||| |||| |||||||| || ||||| Sbjct 1649787 ATGAAATGCTTCTCTCCGGACTTGAGCTTTTCCCAGTCGGCCAGATCTTTGGAGAGATCT 1649728 Query 93593 ACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 |||||||| || ||||| || |||||||| || Sbjct 1649727 ACTTCTTCCACCGTCCAGAAGGATGCTTCGGC 1649696 >seq1743 Length=5597386 Score = 111 bits (122), Expect = 2e-19 Identities = 78/88 (89%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 728627 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 728686 Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||| |||||| || Sbjct 728687 GTGGGTTCGAACCCCACTTCTGACACAT 728714 Score = 109 bits (120), Expect = 6e-19 Identities = 78/89 (88%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 690151 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 690092 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||||||||||| |||||| ||| Sbjct 690091 GTGGGTTCGAACCCCACTTCTGACACATT 690063 >seq938 Length=4797176 Score = 111 bits (122), Expect = 2e-19 Identities = 78/88 (89%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 ||||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 4129477 AGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 4129536 Query 126323 GTGGGTTCGAACCCCACACCTGACAAAT 126350 ||||||||||||||||| |||||| || Sbjct 4129537 GTGGGTTCGAACCCCACTTCTGACACAT 4129564 Score = 109 bits (120), Expect = 6e-19 Identities = 78/89 (88%), Gaps = 2/89 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC--TCGGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||||| |||||| Sbjct 4100911 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTAAGGGAGC 4100852 Query 126323 GTGGGTTCGAACCCCACACCTGACAAATT 126351 ||||||||||||||||| |||||| ||| Sbjct 4100851 GTGGGTTCGAACCCCACTTCTGACACATT 4100823 >seq322 Length=5604141 Score = 111 bits (122), Expect = 2e-19 Identities = 77/85 (91%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||||| || |||||| Sbjct 672969 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGC 672910 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 672909 GTGGGTTCGAACCCCACTTCTGACA 672885 >seq306 Length=5926009 Score = 111 bits (122), Expect = 2e-19 Identities = 77/85 (91%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGC 126322 |||||| |||||||| |||||||||||||||||||||| |||||||||| || |||||| Sbjct 4803541 AGTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGC 4803600 Query 126323 GTGGGTTCGAACCCCACACCTGACA 126347 ||||||||||||||||| |||||| Sbjct 4803601 GTGGGTTCGAACCCCACTTCTGACA 4803625 >seq1654 Length=3606452 Score = 109 bits (120), Expect = 6e-19 Identities = 76/84 (90%), Gaps = 2/84 (2%) Strand=Plus/Plus Query 126266 GTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCG 126323 ||||| |||||||| |||||||||||||||||||||| |||||||||| || ||||||| Sbjct 1118635 GTCAGAATGGCCGAGCGGTCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCG 1118694 Query 126324 TGGGTTCGAACCCCACACCTGACA 126347 |||||||||||||||| |||||| Sbjct 1118695 TGGGTTCGAACCCCACTTCTGACA 1118718 >seq1616 Length=1815783 Score = 89.7 bits (98), Expect = 6e-13 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 126284 TCTAAGGCGCCAGATTTAAGATCTGGTTCCC-TC-GGGAGCGTGGGTTCGAACCCCACAC 126341 |||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| Sbjct 170767 TCTAAGGCGCCAGATTTAAGCTCTGGTTCCCGTCTGGGAGCGTGGGTTCGAACCCCACTT 170826 Query 126342 CTGACA 126347 |||||| Sbjct 170827 CTGACA 170832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843850549400