Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1107 111 3e-19 seq472 111 3e-19 >seq1107 Length=3620151 Score = 111 bits (122), Expect = 3e-19 Identities = 316/484 (65%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295 ||| | | |||||| |||||||| | || || || ||||||||||| |||||||| Sbjct 318475 TTGGCAATGATGTCCCGTGGATTGTGGTTCGGAATCTTGGTCGACCAACCCGTACCGATA 318534 Query 297296 CCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATC 297355 || || || || |||| | | ||||| | |||| ||| | |||||||||| Sbjct 318535 CCTTCCGTGCCGTTGACCAACACCATTGGAATGATTGGCAGATACCAAAGTGGTTCGATC 318594 Query 297356 TTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAAACCTGT 297415 || | ||| || || | |||| ||| ||| ||| ||| | ||| | | Sbjct 318595 TTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATGGGTGGAAGATCAAC 318654 Query 297416 CGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC 297475 |||||| ||| ||| | ||||| || || || | ||| ||| |||||| ||||| Sbjct 318655 CGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAGGACTGGCGCTATCCTTTCCACCA 318714 Query 297476 TGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACA 297535 | | | ||||||||| || ||| | || | |||||||| ||||||||||| Sbjct 318715 GAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATGTTGTTGCTTCCGACG 318774 Query 297536 TAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCG 297595 || | ||| || | || || ||||| || ||| || ||| ||||| || |||||| Sbjct 318775 TAGTTCTGGGCCAAATTGACAATGGTACCGCACAGGGACTGTTCACCATGATGGTAGGCG 318834 Query 297596 CTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGC 297655 || || || ||||| | ||| || |||||||| || | | ||| ||| Sbjct 318835 GACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTCACGCTTATCATTACGC 318894 Query 297656 TTGAA--AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACG 297713 ||||| | ||| | || || || || ||| || |||| ||| || || | ||| Sbjct 318895 TTGAAGCACGTGA--ACATGACCTTTCGCTGACCGGGCTTGAGACCGTCCACCATGCACG 318952 Query 297714 GAAT 297717 |||| Sbjct 318953 GAAT 318956 >seq472 Length=3306290 Score = 111 bits (122), Expect = 3e-19 Identities = 316/484 (65%), Gaps = 4/484 (1%) Strand=Plus/Plus Query 297236 TTGTCTACGATGTCTTTTGGATTGTAACTAGGGATATTAGTCGACCAACCGGTACCGATT 297295 ||| | | |||||| |||||||| | || || || ||||||||||| |||||||| Sbjct 1650273 TTGGCAATGATGTCCCGTGGATTGTGGTTCGGAATCTTGGTCGACCAACCCGTACCGATA 1650332 Query 297296 CCACTCGAACCATTCACCAGAATGCTCGGAATAACAGGCACATAATACTCTGGTTCGATC 297355 || || || || |||| | | ||||| | |||| ||| | |||||||||| Sbjct 1650333 CCTTCCGTTCCGTTGACCAATACCATTGGAATGATTGGCAGATACCAAAGTGGTTCGATC 1650392 Query 297356 TTGTCACCGTCATCATACAGATATTTCAGAAGATTATCGTCCGTATCGACGAAAACCTGT 297415 || | ||| || || | |||| ||| ||| ||| ||| | ||| | | Sbjct 1650393 TTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATGGGTGGAAGATCAAC 1650452 Query 297416 CGAGTCTGAGGGTTCAGTTTTGTGAAAATATATCGTGCACTCGCGTGATCCTTACCACCC 297475 |||||| ||| ||| | ||||| || || || | ||| ||| |||||| ||||| Sbjct 1650453 CGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAGGACTGGCGCTATCCTTTCCACCA 1650512 Query 297476 TGCAATCTCGAACCGAACTGGCCCTCCGGCAACAACCAGTTGATGTTATTGCTTCCGACA 297535 | | | ||||||||| || ||| | || | |||||||| ||||||||||| Sbjct 1650513 GAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATGTTGTTGCTTCCGACG 1650572 Query 297536 TAATCCTGTGCAAGGTTCACGATGGTCCCTTGCAGAGATGCTTCGCCATGGTGATAGGCG 297595 || | ||| || | || || ||||| || ||| || ||| ||||| || |||||| Sbjct 1650573 TAGTTCTGGGCCAAATTGACAATGGTACCGCACAGGGACTGTTCACCATGATGGTAGGCG 1650632 Query 297596 CTATGCTCTGCAACGTAACCGCTGAACTGTGCAACCTTCACGTCGGTCGTCAAATTGCGC 297655 || || || ||||| | ||| || |||||||| || | | ||| ||| Sbjct 1650633 GACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTCACGCTTATCATTACGC 1650692 Query 297656 TTGAA--AGCTGAATATATCACTTTCCGTTGAGAAGGTTTGAAACCATCAACGACCGACG 297713 ||||| | ||| | || || || || ||| || |||| ||| || || | ||| Sbjct 1650693 TTGAAGCACGTGA--ACATGACCTTTCGCTGACCGGGCTTGAGACCGTCCACCATGCACG 1650750 Query 297714 GAAT 297717 |||| Sbjct 1650751 GAAT 1650754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102845591867250