Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1107 129 7e-25 seq472 125 9e-24 seq432 116 4e-21 seq488 114 2e-20 >seq1107 Length=3620151 Score = 129 bits (142), Expect = 7e-25 Identities = 291/432 (67%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 171726 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 171785 |||| || || |||||||| |||||||| || | |||||||||| |||||| ||| Sbjct 318521 AACCCGTACCGATACCTTCCGTGCCGTTGACCAACACCATTGGAATGATTGGCAGATACC 318580 Query 171786 AGTCTGGTTCAATCGCACGCCCATCATCATCCAAATAGTTGAGCACGGGGTCGTCCCTCG 171845 | |||||| ||| | || || | || | |||| || || ||| | Sbjct 318581 AAAGTGGTTCGATCTTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATG 318640 Query 171846 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGA--GA 171903 | | ||||| |||| | || || | ||||||||||| | | || | Sbjct 318641 GGTGGAAGATCAACCGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAG---GACTGG 318697 Query 171904 CGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGA 171962 ||| ||| || ||||| ||||| || || || ||||||| ||| || ||||||| Sbjct 318698 CGCTATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGA 318757 Query 171963 TATTGTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCG-AGGGAGACT 172021 | ||||| || | ||||| | |||||| |||||||| ||| |||| ||||| | Sbjct 318758 TGTTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGCACAGGGACTGT 318816 Query 172022 TCACCGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATC 172081 ||||| ||||||||||| ||| | || ||||| | | |||| ||| || ||||||| | Sbjct 318817 TCACCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACC 318876 Query 172082 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGG 172141 ||| ||| || | |||||||| |||||||||||| ||| |||||||| Sbjct 318877 TCACGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGA 318936 Query 172142 CCGTCGGCCATG 172153 ||||| ||||| Sbjct 318937 CCGTCCACCATG 318948 >seq472 Length=3306290 Score = 125 bits (138), Expect = 9e-24 Identities = 178/248 (72%), Gaps = 2/248 (1%) Strand=Plus/Plus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 ||| || ||||| ||||| || || || ||||||| ||| || |||||||| || Sbjct 1650500 ATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATGTT 1650559 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCG-AGGGAGACTTCAC 172025 ||| || | ||||| | |||||| |||||||| ||| |||| ||||| ||||| Sbjct 1650560 GTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGCACAGGGACTGTTCAC 1650618 Query 172026 CGTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTTCATCTCAT 172085 | ||||||||||| ||| | || ||||| | | |||| ||| || ||||||| |||| Sbjct 1650619 CATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTCAC 1650678 Query 172086 CCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGGCCGT 172145 ||| || | |||||||| |||||||||||| ||| |||||||| |||| Sbjct 1650679 GCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGACCGT 1650738 Query 172146 CGGCCATG 172153 | ||||| Sbjct 1650739 CCACCATG 1650746 >seq432 Length=3773907 Score = 116 bits (128), Expect = 4e-21 Identities = 267/396 (67%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 8541 TCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAGACACCCTTCTATCCA 8600 ||||| ||| || || || |||| | || || |||||| ||||||| |||||||| Sbjct 620336 TCGGAACTGTACGGAAAGGTCGTGGAAACGCCACAGAATGAGAAGACACCGTTCTATCCG 620277 Query 8601 CGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGTGAAGAATTACCGAGA 8659 ||||| |||| | | | ||| | | |||| | ||| | |||| || || || || Sbjct 620276 CGATCTCCGTATGCCTGCGCCAAGATGTACGGCT-ACTGGATTGTGATCAACTATCGGGA 620218 Query 8660 ATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAGTCACCCCGTCGTGG 8719 | | || || | ||||| ||| || || || |||||||||||||| ||||| || || Sbjct 620217 AGCATACGGGATGTTTGCCTGCAATGGGATCCTGTTCAACCACGAGTCGCCCCGGCGAGG 620158 Query 8720 CCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACAAATCGTCGCGGGTGAG 8777 | | | |||||||| | ||| | ||| | ||| | || | ||| | | | | Sbjct 620157 CGAGAACTTCGTGACGAGGAAAGTTACCCGGTCGGTGGCGAAAATTTCG-CTC-AATCAA 620100 Query 8778 AGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACACGCCAAGGAC 8837 | ||| | | | || |||| || || || || || | |||||||| ||||| ||||| Sbjct 620099 ATGGAATGCTTGGAGCTGGGAAATCTGGACTCCAAGCGAGACTGGGGTCACGCACAGGAC 620040 Query 8838 TATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCG 8897 || || || || |||||| | | || || || || || | || || || | || Sbjct 620039 TACGTGGAGGCTATGTGGATGATGCTACAGCAGCCGGAACCGCAGGATTACGTGATTGCT 619980 Query 8898 ACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 ||||| ||| ||||| || ||||| ||||||||| Sbjct 619979 ACGGGCGAGTGTCACTCGGTAAGGGAATTCGTTGAG 619944 >seq488 Length=618892 Score = 114 bits (126), Expect = 2e-20 Identities = 269/398 (68%), Gaps = 10/398 (3%) Strand=Plus/Plus Query 8541 TCGGAGATGTTTGGTAAAGTTAGGGAATCCCCTCAAAATGAGGAGACACCCTTCTATCCA 8600 ||||| ||| || || || |||| | ||||| |||||| ||||||| |||||||| Sbjct 324950 TCGGAACTGTACGGAAAGGTCGTGGAAACGCCTCAGAATGAGAAGACACCGTTCTATCCG 325009 Query 8601 CGATC--CGT-CTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGTGAAGAATTACCGA 8657 ||||| ||| | | ||| | || | | |||| | ||| | |||| || || || Sbjct 325010 CGATCTCCGTACGCTTGCGCCAAAATG--TACGGCT-ACTGGATTGTGATCAACTATCGG 325066 Query 8658 GAATCCTATGGTCTCTTTGCGTGCTCCGGTATTCTCTTCAACCACGAGTCACCCCGTCGT 8717 ||| | || || | ||||| ||| || || || |||||||||||||| ||||| || Sbjct 325067 GAAGCATACGGGATGTTTGCCTGCAATGGGATCCTGTTCAACCACGAGTCGCCCCGGCGA 325126 Query 8718 GGCCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACAAATCGTCGCGGGTG 8775 ||| | | |||||||| | ||| | ||| | ||| | || | ||| | | | Sbjct 325127 GGCGAGAACTTCGTGACGAGGAAAGTTACCCGGTCGGTGGCGAAAATTTCG-CTC-AATC 325184 Query 8776 AGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACACGCCAAGG 8835 | | ||| | | | || |||| || || || || || | |||||||| ||||| ||| Sbjct 325185 AAATGGAATGCTTGGAGCTGGGAAATCTGGACTCCAAGCGAGACTGGGGTCACGCACAGG 325244 Query 8836 ACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCG 8895 |||| || || || |||||| | | || || || || || | || || || | | Sbjct 325245 ACTACGTGGAGGCTATGTGGATGATGCTACAGCAGCCGGAACCGCAGGATTACGTGATTG 325304 Query 8896 CGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 8933 | ||||| ||| ||||| || ||||| ||||||||| Sbjct 325305 CTACGGGCGAGTGTCACTCGGTAAGGGAATTCGTTGAG 325342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597335418049800