Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1930 95.1 9e-15 seq477 86.0 4e-12 >seq1930 Length=1715699 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||| ||| ||||| || |||||||| || || | | | ||||| || || Sbjct 814645 ATGAAGAGTACTCTCTTTCTGAATGTTGTAGTCCGATAGGGTGCGGCCATCTTCCAACTG 814586 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 || || ||| | ||||||||||| ||||| || || |||||||| || |||||| Sbjct 814585 CTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTATCCTGAATTTT 814526 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||| ||| | || || ||||| ||| || || ||||| ||||| ||||| || Sbjct 814525 AGCTTTGACATTCTCGATGGTATCCGAGGGTTCGACCTCCAAGGTGATGGTCTTACCGGT 814466 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 |||||| || || || || |||||| Sbjct 814465 CAGAGTCTTGACGAAGATCTGCATA 814441 Score = 87.8 bits (96), Expect = 1e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 ||||||| | |||||||||||| | ||||||||||| || || || || ||||||| Sbjct 813230 CGTCTTCCAGCTGTTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATACCTTCCT 813171 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAA 15139 | || || || || || |||| |||||||| || || || ||||| | Sbjct 813170 TATCCTGGATCTTAGCCTTGACGTTTTCGATAGTATCCGAGGGCTCAACCTCCAAGGTGA 813111 Query 15140 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||||||||| ||||| || || || || ||||||||| Sbjct 813110 TGGTTTTACCAGTCAGGGTCTTGACGAAGATTTGCATA 813073 Score = 87.8 bits (96), Expect = 1e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 ||||||| | || ||||| ||| | ||||||||||| || || ||| || ||||||| Sbjct 814826 CGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGTGGGATACCTTCCT 814767 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAA 15139 | || ||| ||| || || |||| || ||||| | ||| || || ||||| | Sbjct 814766 TATCTTGAATCTTGGCCTTCACGTTTTCAATGGTATCCGAAGGTTCGACCTCCAAGGTGA 814707 Query 15140 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| ||||| ||||| || || || || || |||||| Sbjct 814706 TGGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCATA 814669 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||||| || || || || ||||| || || | | | ||||| | || Sbjct 813049 ATGAAGGGTACTCTCCTTCTGGATATTGTAGTCCGACAGGGTGCGGCCATCTTCCAGCTG 812990 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||| ||| | ||||||||||| || || || || ||||||||||| || || Sbjct 812989 CTTGCCGGCGAAGATCAAACGCTGCTGATCTGGAGGGATACCTTCCTTGTCCTGGATCTT 812930 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 ||||| |||| |||||||| || || || ||||| ||||||||||| || Sbjct 812929 AGCCTTTACGTTTTCAATAGTATCCGAGGGCTCGACCTCCAAGGTGATGGTTTTACCAGT 812870 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||| || || || || ||||||||| Sbjct 812869 CAGGGTCTTGACGAAGATTTGCATA 812845 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||||||||| || || || |||||||| || || | | | ||||| Sbjct 812143 AACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 812084 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || ||||| ||| | |||||||| || || || ||| ||||||||||| || Sbjct 812083 CAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 812024 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || || ||| |||| || ||||| | ||| || || ||||| ||||| || Sbjct 812023 AATCTTAGCCTTGACATTTTCAATGGTATCCGAAGGTTCAACCTCCAAGGTGATGGTCTT 811964 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| ||| || || || || |||||| Sbjct 811963 GCCGGTCAAAGTCTTGACGAAGATCTGCATA 811933 Score = 82.4 bits (90), Expect = 5e-11 Identities = 141/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||||| || || || |||||||| || ||| | | ||||||| | || Sbjct 812821 ATGAAGGGTACTCTCCTTCTGGATGTTGTAGTCCGACAGAGTACGGCCGTCTTCCAGCTG 812762 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 |||||||| | ||||||||||| ||||| ||| || |||||||| || || || Sbjct 812761 CTTGCCAGCAAAGATCAAACGCTGCTGGTCTGGTGGGATACCTTCCTTATCTTGGATCTT 812702 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 || || |||| || || || ||| || || ||||| ||||| || || || Sbjct 812701 AGCCTTGACGTTTTCGATGGTGTCCGAGGGTTCAACTTCCAAGGTGATGGTCTTGCCAGT 812642 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || || |||||| Sbjct 812641 AAGAGTCTTGACGAAGATCTGCATA 812617 Score = 82.4 bits (90), Expect = 5e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| || || || || ||| | ||||||||||| ||||| || || |||||||| Sbjct 814140 TCTTCCAACTGCTTTCCGGCGAAGATCAAACGCTGCTGGTCTGGAGGGATACCTTCCTTA 814081 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || ||| ||| || || |||| |||||||| ||| || || ||||| ||| Sbjct 814080 TCCTGAATCTTGGCCTTGACGTTTTCAATAGTATCCGAGGGTTCGACCTCCAAGGTGATG 814021 Query 15142 GTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || || ||||| || || || || ||||| Sbjct 814020 GTTTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 813986 >seq477 Length=2976132 Score = 86.0 bits (94), Expect = 4e-12 Identities = 142/205 (69%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 14973 ATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTG 15032 |||||||||| || || || |||||||| || || | | | ||||| || || Sbjct 2304095 ATGAAGGGTACTCTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCATCTTCCAACTG 2304154 Query 15033 TTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTT 15092 ||||||||| | ||||||||||| || || || || |||||||| || ||| || Sbjct 2304155 CTTGCCAGCGAAGATCAAACGCTGCTGATCTGGAGGGATGCCTTCCTTATCCTGAATCTT 2304214 Query 15093 GCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGT 15152 | || || |||| || ||||| || || || ||||| |||||||| || || Sbjct 2304215 GGCCTTCACGTTTTCAATGGTATCCGAGGGCTCGACCTCCAAGGTGATGGTTTTGCCAGT 2304274 Query 15153 CAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || || || |||||| Sbjct 2304275 AAGAGTCTTGACGAAGATCTGCATA 2304299 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 14967 AACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTC 15026 ||| | ||||||||| || || || |||||||| || || | | | ||||| Sbjct 2305913 AACCAGATGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCTTC 2305972 Query 15027 TAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACA 15086 | || ||||| ||| | |||||||| || || || ||| ||||||||||| || Sbjct 2305973 AAGCTGCTTGCCGGCGAAGATCAAACGTTGCTGATCTGGTGGGATTCCTTCCTTATCCTG 2306032 Query 15087 AATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTT 15146 ||| || || ||| |||| || ||||| | ||| || || ||||| ||||| || Sbjct 2306033 AATCTTAGCCTTGACATTTTCAATGGTATCCGAAGGTTCAACCTCCAAGGTGATGGTCTT 2306092 Query 15147 ACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| ||| || || || || |||||| Sbjct 2306093 GCCGGTCAAAGTCTTGACGAAGATCTGCATA 2306123 Score = 82.4 bits (90), Expect = 5e-11 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 ||||||| | || ||||| ||| | ||||||||||| || || ||| || ||||||| Sbjct 2302774 CGTCTTCCAGCTGCTTGCCGGCGAAGATCAAACGCTGCTGATCTGGTGGGATACCTTCCT 2302833 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAA 15139 | || ||| ||| || || |||| || ||||| ||| || || ||||| | Sbjct 2302834 TATCTTGAATCTTGGCCTTCACGTTTTCAATGGTATCCGAGGGTTCGACCTCCAAGGTGA 2302893 Query 15140 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| ||||| ||||| || || || || || |||||| Sbjct 2302894 TGGTCTTACCGGTCAGGGTCTTGACGAAGATCTGCATA 2302931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357381393833975