Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq1107 120 4e-22 seq472 114 2e-20 seq432 111 2e-19 >seq1107 Length=3620151 Score = 120 bits (132), Expect = 4e-22 Identities = 289/432 (67%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||| || || |||||||| |||||||| || | |||||||||| |||||| ||| Sbjct 318521 AACCCGTACCGATACCTTCCGTGCCGTTGACCAACACCATTGGAATGATTGGCAGATACC 318580 Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865 | |||||| ||| | || ||| | || | |||| || |||||| | Sbjct 318581 AAAGTGGTTCGATCTTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATG 318640 Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGA--GA 175923 | | ||||| |||| | || || | ||||||||||| | | || | Sbjct 318641 GGTGGAAGATCAACCGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAG---GACTGG 318697 Query 175924 CGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 175982 ||| ||| || ||||| ||||| || || || ||||||| || || ||||||| Sbjct 318698 CGCTATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGA 318757 Query 175983 TATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCG-AGGGAGACT 176041 | ||||| || | |||| | ||||| |||||||| ||| |||| ||||| | Sbjct 318758 TGTTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGCACAGGGACTGT 318816 Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101 ||||| ||||||||||| ||| | || || || | | |||| ||| || ||||||| | Sbjct 318817 TCACCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACC 318876 Query 176102 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGG 176161 ||| ||| || | |||||||| |||||||||||| ||| |||||||| Sbjct 318877 TCACGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGA 318936 Query 176162 CCGTCGGCCATG 176173 ||||| ||||| Sbjct 318937 CCGTCCACCATG 318948 >seq472 Length=3306290 Score = 114 bits (126), Expect = 2e-20 Identities = 288/432 (67%), Gaps = 8/432 (2%) Strand=Plus/Plus Query 175746 AACCTGTGCCAATACCTTCGGTGCCGTTCACGAGAACCATTGGAAGCGTTGGCATATAGA 175805 |||| || || |||||||| || ||||| || | |||||||||| |||||| ||| Sbjct 1650319 AACCCGTACCGATACCTTCCGTTCCGTTGACCAATACCATTGGAATGATTGGCAGATACC 1650378 Query 175806 AGTCTGGTTCAATCGCACGCCCATCATCGTCCAAATAGTTGAGCACGGGGTCATCCCTCG 175865 | |||||| ||| | || ||| | || | |||| || |||||| | Sbjct 1650379 AAAGTGGTTCGATCTTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATG 1650438 Query 175866 GATCAAAGATTTTACGAGCATCCTTGGTGAGTTTTGTGAAGATGTACCTCGTTTGA--GA 175923 | | ||||| |||| | || || | ||||||||||| | | || | Sbjct 1650439 GGTGGAAGATCAACCGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAG---GACTGG 1650495 Query 175924 CGC-ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACATGGCTCAAGGAGATTGA 175982 ||| ||| || ||||| ||||| || || || ||||||| || || ||||||| Sbjct 1650496 CGCTATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGA 1650555 Query 175983 TATTGTTTGAGCCCATATAGTCATTCGCCAACTTGACAATCGTATCCGCG-AGGGAGACT 176041 | ||||| || | |||| | ||||| |||||||| ||| |||| ||||| | Sbjct 1650556 TGTTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGCACAGGGACTGT 1650614 Query 176042 TCACCGTGATGGTAGGCCGACTTGTCCGCCACATACGCCGCCAACTGCGCCACCTTCATC 176101 ||||| ||||||||||| ||| | || || || | | |||| ||| || ||||||| | Sbjct 1650615 TCACCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACC 1650674 Query 176102 TCATCCTTGAGGTTCTTGTGGAAGCACGCATACATGACCTTTCTCTGTGAAGGCTTGAGG 176161 ||| ||| || | |||||||| |||||||||||| ||| |||||||| Sbjct 1650675 TCACGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGA 1650734 Query 176162 CCGTCGGCCATG 176173 ||||| ||||| Sbjct 1650735 CCGTCCACCATG 1650746 >seq432 Length=3773907 Score = 111 bits (122), Expect = 2e-19 Identities = 265/396 (67%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 10456 TCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAGACGCCCTTCTATCCA 10515 ||||| ||| || || || |||| | ||||| |||||| |||| || |||||||| Sbjct 620336 TCGGAACTGTACGGAAAGGTCGTGGAAACGCCACAGAATGAGAAGACACCGTTCTATCCG 620277 Query 10516 CGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGTGAAGAATTATCGCGA 10574 ||||| |||| | | | ||| | | |||| | ||| | |||| || ||||| || Sbjct 620276 CGATCTCCGTATGCCTGCGCCAAGATGTACGGCT-ACTGGATTGTGATCAACTATCGGGA 620218 Query 10575 ATCCTATGGTCTCTTTGTGTGCTCCGGTATTCTCTTCAACCACGAGTCACCCCGTCGTGG 10634 | | || || | |||| ||| || || || |||||||||||||| ||||| || || Sbjct 620217 AGCATACGGGATGTTTGCCTGCAATGGGATCCTGTTCAACCACGAGTCGCCCCGGCGAGG 620158 Query 10635 CCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACAAATCGTGGCGGGTGAG 10692 | | | |||||||| | ||| | ||| | ||| | | |||| | | | Sbjct 620157 CGAGAACTTCGTGACGAGGAAAGTTACCCGGTCGGTGGCGA--AAATTTCGCTCAATCAA 620100 Query 10693 AGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACACGCCAAGGAC 10752 | ||| | | | || |||| || || || || || | |||||||| ||||| ||||| Sbjct 620099 ATGGAATGCTTGGAGCTGGGAAATCTGGACTCCAAGCGAGACTGGGGTCACGCACAGGAC 620040 Query 10753 TATGTTGAAGCCATGTGGCTCGTACTCCAACAAGAAGAGGCGGACGAATATGTCGTCGCG 10812 || || || || |||||| | | || || || || || | || || || | || Sbjct 620039 TACGTGGAGGCTATGTGGATGATGCTACAGCAGCCGGAACCGCAGGATTACGTGATTGCT 619980 Query 10813 ACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 10848 ||||| ||| ||||| || ||||| ||||||||| Sbjct 619979 ACGGGCGAGTGTCACTCGGTAAGGGAATTCGTTGAG 619944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613488526374600