Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq95 122 1e-22 seq472 96.9 4e-15 seq1107 91.5 2e-13 >seq95 Length=6909593 Score = 122 bits (134), Expect = 1e-22 Identities = 619/978 (63%), Gaps = 19/978 (2%) Strand=Plus/Plus Query 105947 GTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATT 106006 ||||| ||||||||| | || || || || | ||||||||||| || || || ||||| Sbjct 5342927 GTGTACGGTTCAAAGGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATA 5342986 Query 106007 GGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCC 106066 || |||| | || || |||| || | || ||| || || | | | || Sbjct 5342987 GGCGCCAAAAGCAGCGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAAGCGGCC 5343046 Query 106067 CAGTCGTAGTTGAGCT-TGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGG-- 106123 ||||| | | || ||| ||| | |||||| ||| | || || | ||||| | Sbjct 5343047 CAGTCCCACAA-ATCTGTGGGTTCCTTATTCCACATGTCATACTGTAGAATCCCTTTGCT 5343105 Query 106124 GACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTC 106183 ||| || | ||| || | || || || | |||| ||| |||| ||| ||||| Sbjct 5343106 GACCGGGCA--ACCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCGCAGCTG 5343163 Query 106184 GCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCA 106243 ||||| |||| | | || || || || || || | || | || || |||||| Sbjct 5343164 GCCTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGGGCTTCT 5343223 Query 106244 TCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAA 106303 || || | | || || || ||| || |||| || | || || || || | Sbjct 5343224 TCGCTGTCGTAAGGATAACGCATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATT 5343283 Query 106304 CCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACGGGATAAAAATTT 106360 ||||| || | ||| ||||| || ||| ||| | ||| || ||||| ||||| Sbjct 5343284 CCAATCGGGCGGTGACGCATGTTGGAC---CGCTTGGCCTCCGGCACCGGATAGAAATTG 5343340 Query 106361 CTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCA 106420 |||| |||| | ||| ||||| ||||| || | || | | ||| | | ||| | Sbjct 5343341 ATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAATTTCTGG 5343400 Query 106421 TAATCAAAAGTGCGAGTCTC--TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAAT 106478 | || | || | ||| |||| |||| || | ||||| || |||| || Sbjct 5343401 AAGTCGTATGT-CTTGTCGGGTTTCACGAACATGTTT----AACGCGATAGACGCCAGAT 5343455 Query 106479 TGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAAC 106538 ||||||| || | |||||||| | ||| || | ||| || || |||||||| |||| Sbjct 5343456 TGCAAACGGCAATTTCATCCTTTGAGGAGTATTCCACAATCTCAGTGCACAAGTTCGAAC 5343515 Query 106539 TCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCA 106598 ||| || || || | ||| | |||||| |||||| ||||| || || |||||||||| Sbjct 5343516 ACTTGATGGTGCCGATATTTTGTTGGTTGCTCTTTCGATTGCAAGCGTCTTTGTAGAGCA 5343575 Query 106599 TGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTG 106658 |||| || || || || || |||| | ||| || ||||| ||| |||| Sbjct 5343576 TGTATGGAACTCCGGTTTCAACTTGAGACTCAATAATCGCAAACCACAAATCCTGGGCTT 5343635 Query 106659 GTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 106718 || || | || |||||| ||||| ||||| |||||| | |||||| || | Sbjct 5343636 TCACCTTGCGGATGAACCGTCCTTCCGCTTCGTAGGATGTGTACAATTTTTCAAATTCGT 5343695 Query 106719 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 106778 | ||| || || || | || || | | || || | | |||| | | Sbjct 5343696 CGCCCCACGTATCCGATAAGCCAGGACATTCATGCGGGCACATCAAGCACCAGTCTTCGT 5343755 Query 106779 CCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTAC 106838 | || || || |||||||| || || ||||||||||| | | || | || ||| Sbjct 5343756 TGGCTTCCACTCGTTTCATGAACAGATCCGGAATCCACAGCGCGTAGAACATGTCCCTAG 5343815 Query 106839 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 106898 || | ||||| | ||| ||| | || || |||||||| | | ||| | | Sbjct 5343816 CTCGGACATCTTCCGCGCCTGTGTTCTTTTTCAAATCCAGGAACTCGAACACATCTCCAT 5343875 Query 106899 GCCATGGCTCAAGATAGA 106916 |||| ||||| ||||||| Sbjct 5343876 GCCACGGCTCGAGATAGA 5343893 >seq472 Length=3306290 Score = 96.9 bits (106), Expect = 4e-15 Identities = 283/429 (66%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTA--AA 168348 ||||||||||||||||| ||||| || || | |||||||| ||| |||||| || || Sbjct 1650321 CCCGTACCGATACCTTCCGTTCCGTTGACCAATACCATTGGAATGATTGGCAGATACCAA 1650380 Query 168349 AGTCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAG 168408 ||| ||||| || | || || | ||| | || | || |||||| | Sbjct 1650381 AGT--GGTTCGATCTTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATG 1650438 Query 168409 GATCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGT-CTGAGAA 168467 | | |||||| |||| | || || | ||||| ||||| | | ||| | Sbjct 1650439 GGTGGAAGATCAACCGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAGGACTG-GCG 1650497 Query 168468 GCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATG 168527 |||||| ||||| ||||| ||||| || ||||||| ||| || || || ||| Sbjct 1650498 CTATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATG 1650557 Query 168528 TTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGG-ATACTTC 168586 ||||| || ||||| | ||||| || ||||| || |||| ||| | ||| Sbjct 1650558 TTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGCACAGGGACTGTTC 1650616 Query 168587 ACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTC 168646 |||||| ||||| || ||| | || ||||| | | ||||| || || ||||||| || Sbjct 1650617 ACCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTC 1650676 Query 168647 ATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACC 168706 | ||| ||| | |||||| | |||| || || | ||| ||||||||||| Sbjct 1650677 ACGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGACC 1650736 Query 168707 ATCCGCCAT 168715 ||| |||| Sbjct 1650737 GTCCACCAT 1650745 >seq1107 Length=3620151 Score = 91.5 bits (100), Expect = 2e-13 Identities = 282/429 (66%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 168291 CCCGTACCGATACCTTCGGTTCCATTCACGAGAACCATTGGTATGGTTGGCATGTA--AA 168348 ||||||||||||||||| || || || || | |||||||| ||| |||||| || || Sbjct 318523 CCCGTACCGATACCTTCCGTGCCGTTGACCAACACCATTGGAATGATTGGCAGATACCAA 318582 Query 168349 AGTCTGGTTCAATTGAGCGCCCATCATCATCCAAGTAGTTGAGGATCGGGTCATCCCGAG 168408 ||| ||||| || | || || | ||| | || | || |||||| | Sbjct 318583 AGT--GGTTCGATCTTCTGGTTGTCCTCGAACTGGTATTCCAGCAGAGGATCATCCAATG 318640 Query 168409 GATCAAAGATCTTGCGAGCCTCTTTGGTAAGTTTTGTGAAAATGTACCTCGT-CTGAGAA 168467 | | |||||| |||| | || || | ||||| ||||| | | ||| | Sbjct 318641 GGTGGAAGATCAACCGAGTCAACGGGGACAGCATGGTGAAGATGTAACGAGGACTG-GCG 318699 Query 168468 GCATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATG 168527 |||||| ||||| ||||| ||||| || ||||||| ||| || || || ||| Sbjct 318700 CTATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATG 318759 Query 168528 TTGTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGTGTCCGCTAAGG-ATACTTC 168586 ||||| || ||||| | ||||| || ||||| || |||| ||| | ||| Sbjct 318760 TTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGCACAGGGACTGTTC 318818 Query 168587 ACCATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTC 168646 |||||| ||||| || ||| | || ||||| | | ||||| || || ||||||| || Sbjct 318819 ACCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTC 318878 Query 168647 ATCCTTGAGATTCTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGACC 168706 | ||| ||| | |||||| | |||| || || | ||| ||||||||||| Sbjct 318879 ACGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGACC 318938 Query 168707 ATCCGCCAT 168715 ||| |||| Sbjct 318939 GTCCACCAT 318947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589962842459400