Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq657 96.9 4e-15 seq93 96.9 4e-15 >seq657 Length=886039 Score = 96.9 bits (106), Expect = 4e-15 Identities = 179/263 (68%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || ||||| | ||||| || |||||||| || |||| | || || ||| || | Sbjct 610344 CTATCATGCTTGATGATCACCTATCCATCAACGAATGGCATTTTCGAGGACAACGTCGTA 610285 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 | | || | |||| ||| | ||||||| ||||||||||| ||||| || || | Sbjct 610284 GATGTTTGCGAACTTGTCCATCAACATGGTGGCCAGGTATATCTGGATGGGGCCAACATG 610225 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || || || ||| || || | || | || ||||||| |||||| || Sbjct 610224 AACGCTCAAGTGGGTTTATGCCGTCCTGGAGATTTCGGAAGCGATGTATCTCATCTGAAT 610165 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 || || || |||||||| ||||| ||||| |||||||| || || | || || ||||| Sbjct 610164 TTGCACAAAACATTCTGCATTCCTCATGGTGGTGGAGGCCCGGGTATGGGCCCAATTGGC 610105 Query 159778 GTAGCAAAACATCTCACACCATT 159800 ||| | |||||| | ||||| Sbjct 610104 GTAAAAGCACATCTGGCTCCATT 610082 >seq93 Length=3790381 Score = 96.9 bits (106), Expect = 4e-15 Identities = 179/263 (68%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGA 159597 || ||||| | ||||| || |||||||| || |||| | || || ||| || | Sbjct 3292046 CTATCATGCTTGATGATCACCTATCCATCAACGAATGGCATTTTCGAGGACAACGTCGTA 3292105 Query 159598 CAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTA 159657 | | || | |||| ||| | ||||||| ||||||||||| ||||| || || | Sbjct 3292106 GATGTTTGCGAACTTGTCCATCAACATGGTGGCCAGGTATATCTGGATGGGGCCAACATG 3292165 Query 159658 AATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAAC 159717 || || || || ||| || || | || | || ||||||| |||||| || Sbjct 3292166 AACGCTCAAGTGGGTTTATGCCGTCCTGGAGATTTCGGAAGCGATGTATCTCATCTGAAT 3292225 Query 159718 TTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGT 159777 || || || |||||||| ||||| ||||| |||||||| || || | || || ||||| Sbjct 3292226 TTGCACAAAACATTCTGCATTCCTCATGGTGGTGGAGGCCCGGGTATGGGCCCAATTGGC 3292285 Query 159778 GTAGCAAAACATCTCACACCATT 159800 ||| | |||||| | ||||| Sbjct 3292286 GTAAAAGCACATCTGGCTCCATT 3292308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588033301191600