Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq1059 116 5e-21 >seq1059 Length=7278328 Score = 116 bits (128), Expect = 5e-21 Identities = 184/262 (70%), Gaps = 4/262 (2%) Strand=Plus/Minus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCGTACATCTGGTTGTCG 197082 || ||||||||| || || || |||||||| || ||| | ||| | ||| || Sbjct 2743608 AGGTCCTCGTCGGAGAATCCGGTTCCGATCTTGCAGATGCTCTGGTATTCTTCGTTTTCT 2743549 Query 197083 GGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGTTG 197142 | ||| || ||||| | |||| | ||||| ||||| |||| ||| ||| || ||| Sbjct 2743548 TCGTCGTAGCAAGCGAGGAGGAAACCTCCGTAAGTTCCGGTTCGCTTGCCCCTGCCCTTG 2743489 Query 197143 AAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCTTC 197202 |||| ||||| || ||||||||||||| || | || || | |||||| || || Sbjct 2743488 TAGCCGCCGATCACGACCAGATCCAGAGAATCTCCGACGCCCGAGAGGTAATCCTTTTTT 2743429 Query 197203 AGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTC--CAGGG 197260 || ||||||||| | | || | ||||| || |||||||| || || | || |||| Sbjct 2743428 AGCTTGAGCCAGTTCCGCGAACGTTTGGCGATTTCGTAGGTGGC--TTCCTTCTGGAGGG 2743371 Query 197261 TCTTGATCATCAATCCCTCGCA 197282 |||||| ||||| || ||||| Sbjct 2743370 TCTTGACCATCAGGCCTTCGCA 2743349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676709002042800