Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq175 197 3e-45 seq95 181 2e-40 seq1662 132 9e-26 seq1902 129 1e-24 >seq175 Length=5193165 Score = 197 bits (218), Expect = 3e-45 Identities = 844/1310 (64%), Gaps = 58/1310 (4%) Strand=Plus/Minus Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 || |||||| ||||| || || || | | | ||||| ||| |||||||| || || | Sbjct 3013846 TACCTGGAATTCACCGGACAGTACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCAAA 3013787 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 | ||||||||| || ||||| ||||| || || || ||||| || |||| || || Sbjct 3013786 GGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATAGGCGCCAAAAGAAG 3013727 Query 213035 ACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGTCCCATCTG 213092 || | |||||||| | | |||| | |||| ||||||||||| Sbjct 3013726 CGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAAGCG--GCCCAGTCCCA---- 3013673 Query 213093 CCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACG 213152 |||| || ||||| ||||||||||||| |||| | || |||||||| || Sbjct 3013672 -CAGATCTGTGGGT-TCCTT---GTTCCACATGTCATACTGTAGAATTCCTTTGCTGACC 3013618 Query 213153 GGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGC 213212 |||| || |||| ||| | ||| | | | ||||| |||||| || | Sbjct 3013617 GGGCAACCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCGCAGCTGGCTTCA 3013558 Query 213213 AGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGG--G 213270 |||||| | |||||||| || || || |||| ||| ||||||| ||| ||| | | Sbjct 3013557 AGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGGGCTTCTTCGCTG 3013498 Query 213271 ACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGA 213330 ||| |||| | | ||| | |||| |||| |||| |||||||| || || || | Sbjct 3013497 TCGT-AAGGATAACG-CATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATTCCAA 3013440 Query 213331 TGGGTCTGTGTCTCAGGTTAGAC--TTGGAGCACTCCTCCAAGGGGTAAAAGTTGCAGTC 213388 | || | ||| | || ||| ||| || | || |||| || || || || ||| ||| Sbjct 3013439 TCGGGCGGTGGCGCATGTTGGACCGTTTG-GC-CTCCGGCACCGGATAGAAATTGATGTC 3013382 Query 213389 GATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATT 213448 |||||| |||||||| || |||||| ||||| || | ||| | || | Sbjct 3013381 GATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAGTTTCTGG----- 3013327 Query 213449 GAACACGTAGCCCCCGTCCTG---CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCA 213505 || |||| | ||| | ||| ||| | ||||| ||||| ||||| Sbjct 3013326 -AAGTCGTATGTCTTGTCGGGTTTCACGAACATGTTTAACGCGATAGACGCCAGATTGCA 3013268 Query 213506 AACGGCCA---CCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCA 213562 |||||| | | || | ||| | ||| |||| ||| |||||||||||||| || Sbjct 3013267 AACGGCAATTTCATCTTTTGAG---GAGTATTCCACGATTTCGGTGCACAGGTTCGAACA 3013211 Query 213563 TCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCAT 213622 ||||||||| | ||| || ||||| |||| |||| || ||||| || ||||| Sbjct 3013210 CTTGATGGTGCCGATGTTTTGCTGGTTGCTCTTTCGGTTGCAAGCGTCCTTATATAGCAT 3013151 Query 213623 GTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG-GCCT 213681 ||| || ||||| || | ||||| | | ||| | ||| || | | || || | Sbjct 3013150 GTATGGAACTCCGGTTTCAACTTGGGATTCAATAATCGCGAACCACAGAT-CTTGCGCTT 3013092 Query 213682 TGACCACCCGCCTGACAGCTCCGGGCGTA-GCCTCGTACTGTTCGTAGAGCTCGTTGAAT 213740 | ||| || ||| ||| | | || ||||| | ||| || | | || Sbjct 3013091 TCACCTTGCGGATGAA----CCGACCTTCCGCTTCGTAGGATGTGTACAGTTTTTCAAAC 3013036 Query 213741 TCGTGGCCCCAGACCCTGTCC---AGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCA 213796 |||| |||||| | | || | ||| ||||| |||||| ||||| | || ||| Sbjct 3013035 TCGTCGCCCCA---CGTATCAGATAATCCAGGACATTCGTGCGGG-CACATCAAGCACCA 3012980 Query 213797 GTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAG 213856 ||| ||| || |||| | ||||||||| ||||| | |||||||||| ||||| Sbjct 3012979 GTCTTCGTTGGCTTCCACTCGTTTCATGAACAGATCCGGAATCCACAGCGCGTAGAACAT 3012920 Query 213857 GTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGAT 213916 |||||| | | || ||| | || | ||| || || ||| || || || || | Sbjct 3012919 GTCCCTAGCTCGGACATCTTCCGCGCCTGTGTTCTTTTTCAAATCCAGGAACTCGAACAC 3012860 Query 213917 GTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCCCTG 213973 || | ||||||||||||| ||||||||||| || || |||||| ||||| ||||| Sbjct 3012859 ATCTCCATGCCACGGCTCCAGATAGATGGCAAATGCACCAGGCCTCTTGTTGCCTCCCTG 3012800 Query 213974 GTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTG 214033 ||||| | ||||| | ||| | | | || | || | || |||||||| Sbjct 3012799 ATCCACGTACTTGGCCGTATTATTGTACACCCTCAACATCGGAATCAATCCGTTGGAGAT 3012740 Query 214034 TCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGCCCT 214091 |||||||| || || || || | || || | | | ||| ||| | | || Sbjct 3012739 GCCGTTGGTCCCAGCAATGTAGGTTCCCTTCGCTCGGATGCAGTGCACATTCAAA--CCA 3012682 Query 214092 ATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCC 214151 || || |||||| | ||||| |||| || || | ||| || || ||| || | Sbjct 3012681 ATACCGCCGGCGGATTTGGAAATCAACGCACACTGTTTCAACGTATCGTAGATACCCTCA 3012622 Query 214152 ATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201 ||||| || || | | | ||| || ||||||| ||| | ||| ||||| Sbjct 3012621 ATGCTATCGTCGCTCATGGTCAACAGGAAGCAGGACGATAACTGAGGCCT 3012572 >seq95 Length=6909593 Score = 181 bits (200), Expect = 2e-40 Identities = 838/1313 (64%), Gaps = 64/1313 (5%) Strand=Plus/Plus Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 || |||||| ||||| || || || | | | ||||| ||| |||||||| || || | Sbjct 5342881 TACCTGGAATTCACCGGACAGTACTCGTCGGTTGTAAACGTTGGAAGTGTACGGTTCAAA 5342940 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 | ||||||||| || ||||| ||||| || || || ||||| || |||| || || Sbjct 5342941 GGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTCGGCATAGGCGCCAAAAGCAG 5343000 Query 213035 ACTGTTCCTCACTCCGTGCTCGCCGATG--AGGCGCCGAAGCTCTGCCCAGTCCCA---- 213088 || | |||||||| | | |||| | |||| ||||||||||| Sbjct 5343001 CGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAAGCG--GCCCAGTCCCACAAA 5343058 Query 213089 TCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCT 213148 |||| ||| ||||| |||||||||||| |||| | || |||||||| Sbjct 5343059 TCTGTG-----GGT-----TCCTTA---TTCCACATGTCATACTGTAGAATCCCTTTGCT 5343105 Query 213149 CACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGC 213208 || |||| || |||| ||| | ||| | | | ||||| |||||| || Sbjct 5343106 GACCGGGCAACCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCGCAGCTGGC 5343165 Query 213209 CTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGG 213268 || |||||| | |||||||| || || || |||| ||| ||||||| ||| ||| Sbjct 5343166 CTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGGGCTTCTTC 5343225 Query 213269 G--GACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATG 213326 | | ||| |||| | | ||| | |||| |||| |||| |||||||| || || Sbjct 5343226 GCTGTCGT-AAGGATAACG-CATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATT 5343283 Query 213327 CCGATGGGTCTGTGTCTCAGGTTAGAC---TTGGAGCACTCCTCCAAGGGGTAAAAGTTG 213383 || || || | ||| | || ||| ||| |||| |||| || || || || ||| Sbjct 5343284 CCAATCGGGCGGTGACGCATGTTGGACCGCTTGGC---CTCCGGCACCGGATAGAAATTG 5343340 Query 213384 CAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCG 213443 ||||||||| |||||||| || |||||| ||||| || | || | || | Sbjct 5343341 ATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAATTTCTGG 5343400 Query 213444 TGATTGAACACGTAGCCCCCGTCCTG---CACAAACTCAGGCAGGGCGATGCTGGCCAGG 213500 || |||| | ||| | ||| ||| | ||||| ||||| Sbjct 5343401 ------AAGTCGTATGTCTTGTCGGGTTTCACGAACATGTTTAACGCGATAGACGCCAGA 5343454 Query 213501 TTGCAAACGGCCA---CCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTG 213557 ||||||||||| | | |||| ||| | ||| |||| ||||| ||||||| ||| Sbjct 5343455 TTGCAAACGGCAATTTCATCCTTTGAG---GAGTATTCCACAATCTCAGTGCACAAGTTC 5343511 Query 213558 CTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAG 213617 || ||||||||| | || || ||||| |||| ||| || || |||||| Sbjct 5343512 GAACACTTGATGGTGCCGATATTTTGTTGGTTGCTCTTTCGATTGCAAGCGTCTTTGTAG 5343571 Query 213618 AGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGTACCTG 213677 |||||||| || ||||| || | || ||| | | ||| ||| | | | | Sbjct 5343572 AGCATGTATGGAACTCCGGTTTCAACTTGAGACTCAATAATCGCAAACCACAAATCCTGG 5343631 Query 213678 GCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTG 213737 || || ||| || ||| ||| || | ||||| | ||| | | | Sbjct 5343632 GCTTTCACCTTGCGGATGAACCGTCCTTCCG---CTTCGTAGGATGTGTACAATTTTTCA 5343688 Query 213738 AATTCGTGGCCCCAGACCCTGTCCAGT---CCCGGACAGG-ATGCGGGACACATGAGGCT 213793 ||||||| |||||| | | ||| | || ||||| ||||||| ||||| | || Sbjct 5343689 AATTCGTCGCCCCA---CGTATCCGATAAGCCAGGACATTCATGCGGG-CACATCAAGCA 5343744 Query 213794 CCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAA 213853 |||||| ||| || |||| | ||||||||| ||||| | |||||||||| ||| Sbjct 5343745 CCAGTCTTCGTTGGCTTCCACTCGTTTCATGAACAGATCCGGAATCCACAGCGCGTAGAA 5343804 Query 213854 CAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAA 213913 || |||||| | | || ||| | || | ||| || || ||| || || || || Sbjct 5343805 CATGTCCCTAGCTCGGACATCTTCCGCGCCTGTGTTCTTTTTCAAATCCAGGAACTCGAA 5343864 Query 213914 GATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTC---TTGCCGCC 213970 | || | ||||||||||| | ||||||||||| || || |||||| ||||| || Sbjct 5343865 CACATCTCCATGCCACGGCTCGAGATAGATGGCAAATGCACCAGGCCTCTTGTTGCCTCC 5343924 Query 213971 CTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGA 214030 ||| ||||| | | ||| | ||| | | | || | || | || |||||||| Sbjct 5343925 CTGATCCACGTACTTAGCCGTATTATTGTACACCCTCAACATCGGAATCAATCCGTTGGA 5343984 Query 214031 CTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGG--TTGCTCATGGAGAGC 214088 ||||| ||||| || || || | || ||| | | | ||| ||| | | Sbjct 5343985 GATGCCGTTAGTTCCGGCAATGTAGGTTCCTTTGGCTCGGATGCAGTGCACATTCAAA-- 5344042 Query 214089 CCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCG 214148 || || || |||||| | ||||| |||| || || | ||| || || |||||| Sbjct 5344043 CCAATACCGCCGGCGGATTTGGAAATCAACGCACACTGTTTCAACGTATCGTAGATGCCC 5344102 Query 214149 GCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGGCCT 214201 | ||||| || || | | | ||| || ||||||| ||| | ||| ||||| Sbjct 5344103 TCAATGCTATCGTCGCTCATGGTCAACAGGAAGCAGGACGATAACTGTGGCCT 5344155 >seq1662 Length=3905379 Score = 132 bits (146), Expect = 9e-26 Identities = 265/391 (68%), Gaps = 5/391 (1%) Strand=Plus/Minus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 |||||| ||| || ||| | |||||||| | ||||| || | ||||||||| | Sbjct 1651947 CAGCAGTCTATCGGCCACGAATTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCAAG 1651888 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | || || | || || || | ||||||| ||| ||| |||| ||||||| | Sbjct 1651887 CAAATCAACCGGAAGGGCTTTCGTCAAGAACTCCTGCTCAATCAGCACTGCTTCCCGGAT 1651828 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGG-CATAGAGCATGC 48131 || | | || || || || ||||| | ||| | ||| |||| | || Sbjct 1651827 GATTTCAATCACACGTTCCTGCGACGGTTTCTGAACCAGATATTTGAACATA----AGGC 1651772 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | ||||||||| |||| | ||| ||||| ||| ||| ||| |||||||||| || | Sbjct 1651771 AAGCAAAGTCCGTGTGTAGGCCCTCGTCACGGGAGATCAGCTCGTTGGAGAAAGTAAGGC 1651712 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||| | || | || |||||||| || || | ||| || || |||||||| Sbjct 1651711 CGGGCATCAGGCCGCGCTTCTTGAGCCAAAATATGGACGCAAAGCTACCGCTGAAGAAGA 1651652 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 |||| ||||| || ||||| ||| | | |||||| ||| ||| | ||| |||| Sbjct 1651651 TGCCTTCCACGGCGGCGAAGGCGACCACGCGCTCTCCAAAATTAGCCTGCTTACTGGAGA 1651592 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTT 48342 ||||| |||||||||||||| |||||||| Sbjct 1651591 TCCAGTTCAGCGCCCAGTCTGCTTTCTTCTT 1651561 >seq1902 Length=3516739 Score = 129 bits (142), Expect = 1e-24 Identities = 264/391 (68%), Gaps = 5/391 (1%) Strand=Plus/Plus Query 47953 CAGCAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTAT 48012 |||||| ||| || ||| | |||||||| | ||||| || | ||||||||| | Sbjct 3490125 CAGCAGTCTATCGGCCACGAATTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCAAG 3490184 Query 48013 GAGGGACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCAC 48072 | || || | || || || | ||||||| ||| ||| |||| ||||||| | Sbjct 3490185 CAAATCAACCGGAAGGGCTTTCGTCAAGAACTCCTGCTCAATCAGCACTGCTTCCCGGAT 3490244 Query 48073 AATCTGCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGG-CATAGAGCATGC 48131 || | | || || || || ||||| | ||| | ||| |||| | || Sbjct 3490245 GATTTCAATCACACGTTCCTGCGACGGTTTCTGAACCAGATATTTGAACATA----AGGC 3490300 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | ||||||||| |||| | ||| ||||| ||| ||| ||| |||||||||| || | Sbjct 3490301 AAGCAAAGTCCGTGTGTAGGCCCTCGTCACGGGAGATCAGCTCGTTGGAGAAAGTAAGGC 3490360 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||| | || | || |||||||| || || | ||| || || |||||||| Sbjct 3490361 CGGGCATCAGGCCGCGCTTCTTGAGCCAAAATATGGACGCAAAGCTACCGCTGAAGAAGA 3490420 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 |||| ||||| || || || ||| | | |||||| ||| ||| | ||| |||| Sbjct 3490421 TGCCTTCCACGGCGGCAAAGGCGACCACGCGCTCTCCAAAATTAGCCTGCTTACTGGAGA 3490480 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTT 48342 ||||| |||||||||||||| |||||||| Sbjct 3490481 TCCAGTTCAGCGCCCAGTCTGCTTTCTTCTT 3490511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931504446470400