Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1902 149 1e-30 seq1662 143 5e-29 seq175 129 1e-24 seq95 118 2e-21 >seq1902 Length=3516739 Score = 149 bits (164), Expect = 1e-30 Identities = 179/241 (74%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 25794 TGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAA 25853 ||||||||| | ||||| | | |||| ||| || ||||| |||| |||||| Sbjct 3490536 TGCCATCGATAATCTACCCTGTGTGAAGAAGAAAGCAGACTGGGCGCTGAACTGGATCTC 3490477 Query 25854 CAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTT 25913 ||| || |||| ||||| ||||| |||| |||||||| || ||||| |||||||| Sbjct 3490476 CAGTAAGCAGGCTAATTTTGGAGAGCGCGTGGTCGCCTTTGCCGCCGTGGAAGGCATCTT 3490417 Query 25914 TTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCT 25973 ||||||||| |||||| |||| || ||||||||| || || |||||||| || Sbjct 3490416 CTTCAGCGGTAGCTTTGCGTCCATATTTTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCT 3490357 Query 25974 GTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCC 26032 |||||| ||||||||||| ||| | | |||||||| || |||| || ||||| |||| Sbjct 3490356 -TACTTTCTCCAACGAGCTGATCTCCCGTGACGAGGGCCTACACACGGACTTTGCTTGCC 3490298 Query 26033 T 26033 | Sbjct 3490297 T 3490297 >seq1662 Length=3905379 Score = 143 bits (158), Expect = 5e-29 Identities = 178/241 (74%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 25794 TGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAA 25853 ||||||||| | ||||| | | |||| ||| || ||||| |||| |||||| Sbjct 1651536 TGCCATCGATAATCTACCCTGTGTGAAGAAGAAAGCAGACTGGGCGCTGAACTGGATCTC 1651595 Query 25854 CAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTT 25913 ||| || |||| ||||| ||||| |||| ||||| || || ||||| |||||||| Sbjct 1651596 CAGTAAGCAGGCTAATTTTGGAGAGCGCGTGGTCGCCTTCGCCGCCGTGGAAGGCATCTT 1651655 Query 25914 TTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCT 25973 ||||||||| |||||| |||| || ||||||||| || || |||||||| || Sbjct 1651656 CTTCAGCGGTAGCTTTGCGTCCATATTTTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCT 1651715 Query 25974 GTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCC 26032 |||||| ||||||||||| ||| | | |||||||| || |||| || ||||| |||| Sbjct 1651716 -TACTTTCTCCAACGAGCTGATCTCCCGTGACGAGGGCCTACACACGGACTTTGCTTGCC 1651774 Query 26033 T 26033 | Sbjct 1651775 T 1651775 >seq175 Length=5193165 Score = 129 bits (142), Expect = 1e-24 Identities = 728/1154 (63%), Gaps = 35/1154 (3%) Strand=Plus/Minus Query 221496 GCATCTGAAAGA---CGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCC 221552 ||||| ||| || | ||||||| |||||| || || || || || || | ||| | | Sbjct 3013484 GCATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATTCCAATCGGGCGGTGGCGCA 3013425 Query 221553 TGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGT 221612 ||||||| || || ||||| ||||| || |||| |||||| | |||||||| | Sbjct 3013424 TGTTGGACCGTTTGGCCTCCGGCACCGGATAGAAATTGATGTCGATGATTTTGTTGAGAT 3013365 Query 221613 TCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCCGC 221672 || ||| ||| || || |||| |||||| || ||| Sbjct 3013364 TCTTGGTGGCAGTTTTGGATACTTCTTTCAGTTTCTGG------------AAGTCGTAT- 3013318 Query 221673 CGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCA 221732 ||| || ||| ||| || || ||||| || | ||||| || || ||||| | Sbjct 3013317 -GTCTTGTCGGGTTTC-ACGAACATGTTTAACGCGATAGACGCCAGATTGCAAACGGCAA 3013260 Query 221733 CCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCC 221792 || || || || || | | ||| || || || ||||| ||||||||||| | Sbjct 3013259 TTTCATCTTTTGAGGAGTATTCCACGATTTCGGTGCACAGGTTCGAACACTTGATGGTGC 3013200 Query 221793 CCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGC 221852 | | || | || || ||| || ||| ||||||||| || ||||| | ||| | | Sbjct 3013199 CGATGTTTTGCTGGTTGCTCTTTCGGTTGCAAGCGTCCTTATATAGCATGTATGGAACTC 3013140 Query 221853 CAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCTCT 221912 | || || | || | | | |||| | ||| || ||| || ||||| | | Sbjct 3013139 CGGTTTCAACTTGGGATTCAATAATCGCGAACCACAGATCTTGCGCTTTCACCTTGCGGA 3013080 Query 221913 TGACTGCACCCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACG 221972 ||| ||| || | ||| || || || || | ||||||| || || ||| Sbjct 3013079 TGAACCGACCTTCCGC---TTCGTAGGATGTGTACAGTTTTTCAAACTCGTCGCCCCACG 3013023 Query 221973 CCTCGTCCAGGCCTGGACACCTG-GCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTG 222031 || | || ||||| | ||||| ||||||| | ||||| | |||| ||| Sbjct 3013022 TATCAGATAATCCAGGACATTCGTGCGGG-CACATCAAGCACCAGTCTTCGTTGGCTTCC 3012964 Query 222032 ACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGC 222091 || | | |||||| || ||||| ||||||||||| | || | || || | || Sbjct 3012963 ACTCGTTTCATGAACAGATCCGGAATCCACAGCGCGTAGAACATGTCCCTAGCTCGGACA 3012904 Query 222092 TCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGC 222151 || ||| |||| |||| || ||| ||||| ||||| || | || | ||||||||| Sbjct 3012903 TCTTCCGCGCCTGTGTTCTTTTTCAAATCCAGGAACTCGAACACATCTCCATGCCACGGC 3012844 Query 222152 TCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCC 222211 |||||||||| ||| | || || || | ||||||||| ||||||||||| | | || Sbjct 3012843 TCCAGATAGATGGCAAATGCACCAGGCCTCTTGTTGCCTCCCTGATCCACGTACTTGGCC 3012784 Query 222212 AGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTA 222271 | ||| | | | | |||| | || ||||||||| |||||||| || | Sbjct 3012783 GTATTATTGTACACCCTCAACATCGGAATCAATCCGTTGGAGATGCCGTTGGTCCCAGCA 3012724 Query 222272 ATGTACGCACCGCCGGCCCTCAGGTTACTG-GCAGA--CATGCCGATACCACCGGCGTGT 222328 ||||| | | || | ||| || | | | ||| | || || ||||| |||||| | Sbjct 3012723 ATGTAGGTTC--CCTTCGCTC-GGATGCAGTGCACATTCAAACCAATACCGCCGGCGGAT 3012667 Query 222329 TTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTG 222388 || || |||| || || || | || || ||| ||||| || || || | Sbjct 3012666 TTGGAAATCAACGCACACTGTTTCAACGTATCGTAGATACCCTCAATGCTATCGTCGCTC 3012607 Query 222389 ACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTG 222448 | | ||| ||| || || ||||| | ||||| | | ||| ||||| || Sbjct 3012606 ATGGTCAACAGGAAGCAGGACGATAACTGAGGCCTACACGTTGCGGCCGCAAACATGGTA 3012547 Query 222449 GGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCG 222508 || ||||| || ||||| | | |||| || | || ||||| | | | | || Sbjct 3012546 GGCGAAGCGTGGGTGAAGTATCTCTCCGACAGCAAGTTATATGTCTCAATGGCCGCGTCG 3012487 Query 222509 ATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCCAC- 222567 |||| ||||||||||| ||||| | ||| |||||| |||||| | ||||| Sbjct 3012486 ATGTCTTCCCCGTGAATACCGATGGCCACGCGCATCAACATGTGCTGGGGACGTTCCACG 3012427 Query 222568 --AGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAG 222625 |||||| || || ||||| || || |||| || ||||| || |||||| Sbjct 3012426 ATCTTACCCTT-GATCT--TAAGCAGATAGGACCGCTCCAACGTTTTGAAGCCGAAGTAG 3012370 Query 222626 TTGAGGTCAAAGTC 222639 ||| | ||||||| Sbjct 3012369 TTGTAGCCAAAGTC 3012356 >seq95 Length=6909593 Score = 118 bits (130), Expect = 2e-21 Identities = 728/1157 (63%), Gaps = 41/1157 (4%) Strand=Plus/Plus Query 221496 GCATCTGAAAGA---CGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCC 221552 ||||| ||| || | ||||||| |||||| || || || || || || | ||| | | Sbjct 5343243 GCATCAGAATGAACGCATCGGCCATTCCCTGGACGCCAATTCCAATCGGGCGGTGACGCA 5343302 Query 221553 TGTTGGAAGCGGCC--GCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAG 221610 ||||||| | || || || ||||| ||||| || |||| |||||| | |||||||| Sbjct 5343303 TGTTGGA--CCGCTTGGCCTCCGGCACCGGATAGAAATTGATGTCGATGATTTTGTTGAG 5343360 Query 221611 GTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACACCAACTCGCC 221670 ||| ||| ||| || || ||| |||||| || ||| Sbjct 5343361 ATTCTTGGTGGCAGTTTTGGATACTTCTTTCAATTTCTGG------------AAGTCGTA 5343408 Query 221671 GCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGC 221730 ||| || ||| ||| || || ||||| || | ||||| || || ||||| Sbjct 5343409 T--GTCTTGTCGGGTTTC-ACGAACATGTTTAACGCGATAGACGCCAGATTGCAAACGGC 5343465 Query 221731 CACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGT 221790 | || ||||| || || | | ||||| || || | ||| ||||||||||| Sbjct 5343466 AATTTCATCCTTTGAGGAGTATTCCACAATCTCAGTGCACAAGTTCGAACACTTGATGGT 5343525 Query 221791 CCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACC 221850 || | | | || || ||| |||||| |||||| ||||||||||| | ||| | Sbjct 5343526 GCCGATATTTTGTTGGTTGCTCTTTCGATTGCAAGCGTCTTTGTAGAGCATGTATGGAAC 5343585 Query 221851 GCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGCTCACCGTCCT 221910 || || || | |||| | | | |||| ||| | || ||| ||||| | | Sbjct 5343586 TCCGGTTTCAACTTGAGACTCAATAATCGCAAACCACAAATCCTGGGCTTTCACCTTGCG 5343645 Query 221911 CTTGACTGCACCCTCGGTCTT-TTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGT 221969 ||| ||| || || ||| || || || | | ||||| | || || Sbjct 5343646 GATGA----ACCGTCCTTCCGCTTCGTAGGATGTGTACAATTTTTCAAATTCGTCGCCCC 5343701 Query 221970 ACGCCTCGTCCAGGCCTGGACAC-CTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCT 222028 ||| || | ||| ||||| | ||||| ||||||| | ||||| | |||| || Sbjct 5343702 ACGTATCCGATAAGCCAGGACATTCATGCGGG-CACATCAAGCACCAGTCTTCGTTGGCT 5343760 Query 222029 TTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGC 222088 | || | | |||||| || ||||| ||||||||||| | || | || || | || Sbjct 5343761 TCCACTCGTTTCATGAACAGATCCGGAATCCACAGCGCGTAGAACATGTCCCTAGCTCGG 5343820 Query 222089 TGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCAC 222148 || ||| |||| |||| || ||| ||||| ||||| || | || | |||||| Sbjct 5343821 ACATCTTCCGCGCCTGTGTTCTTTTTCAAATCCAGGAACTCGAACACATCTCCATGCCAC 5343880 Query 222149 GGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTC 222208 ||||| ||||||| ||| | || || || | ||||||||| ||||||||||| | | Sbjct 5343881 GGCTCGAGATAGATGGCAAATGCACCAGGCCTCTTGTTGCCTCCCTGATCCACGTACTTA 5343940 Query 222209 TCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCC 222268 || | ||| | | | | |||| | || ||||||||| ||||| || || Sbjct 5343941 GCCGTATTATTGTACACCCTCAACATCGGAATCAATCCGTTGGAGATGCCGTTAGTTCCG 5344000 Query 222269 TTAATGTACGCACCGCCGGCCCTCAGGTTACTG-GCAGA--CATGCCGATACCACCGGCG 222325 |||||| | || ||| | || | | | ||| | || || ||||| |||||| Sbjct 5344001 GCAATGTAGGTTCCTTTGGCTC---GGATGCAGTGCACATTCAAACCAATACCGCCGGCG 5344057 Query 222326 TGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCC 222385 ||| || |||| || || || | || || ||||||||| || || || Sbjct 5344058 GATTTGGAAATCAACGCACACTGTTTCAACGTATCGTAGATGCCCTCAATGCTATCGTCG 5344117 Query 222386 TTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGC 222445 | | | ||| ||| || || ||||| | ||| | | | ||| ||||| Sbjct 5344118 CTCATGGTCAACAGGAAGCAGGACGATAACTGTGGCCTACACGTTGCGGCCGCAAACATG 5344177 Query 222446 GTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTG 222505 || || ||||| || ||||| | | |||| || | || ||||| | | | | Sbjct 5344178 GTAGGCGAAGCGTGAGTGAAGTATCTCTCCGACAGCAAGTTATATGTCTCAATGGCCGCG 5344237 Query 222506 GCGATGTTGTCCCCGTGAATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCTCC 222565 |||||| ||||||||||| ||||| | ||| |||||| |||||| | ||| Sbjct 5344238 TCGATGTCTTCCCCGTGAATACCGATGGCCACGCGCATCAACATGTGCTGGGGACGTTCC 5344297 Query 222566 AC---AGGACCCTTGGAGCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAG 222622 || |||||| || || |||| || || | |||| || ||||| || ||| Sbjct 5344298 ACGATCTTACCCTT-GATCT--TAAGCAAATAGGACCTCTCCAACGTTTTGAAGCCGAAG 5344354 Query 222623 TAGTTGAGGTCAAAGTC 222639 |||||| | ||||||| Sbjct 5344355 TAGTTGTAGCCAAAGTC 5344371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928816528286400