Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq657 96.9 4e-15 seq93 96.9 4e-15 >seq657 Length=886039 Score = 96.9 bits (106), Expect = 4e-15 Identities = 179/263 (68%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 ||||| | |||||| | ||| ||||| || || | || || |||||||| ||||| Sbjct 610082 AATGGAGCCAGATGTGCTTTTACGCCAATTGGGCCCATACCCGGGCCTCCACCACCATGA 610141 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||| |||||||| || || ||||| |||||| ||||||| || | || | || Sbjct 610142 GGAATGCAGAATGTTTTGTGCAAATTCAGATGAGATACATCGCTTCCGAAATCTCCAGGA 610201 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 || ||| || || || || | || || ||||| ||||||||||| ||||||| Sbjct 610202 CGGCATAAACCCACTTGAGCGTTCATGTTGGCCCCATCCAGATATACCTGGCCACCATGT 610261 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 | ||| || | | || | | | || ||| || || | |||| || |||||| Sbjct 610262 TGATGGACAAGTTCGCAAACATCTACGACGTTGTCCTCGAAAATGCCATTCGTTGATGGA 610321 Query 138402 TATGTAATCATAATACATGAGAG 138424 || || ||||| | ||||| || Sbjct 610322 TAGGTGATCATCAAGCATGATAG 610344 >seq93 Length=3790381 Score = 96.9 bits (106), Expect = 4e-15 Identities = 179/263 (68%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 138162 AATGGTGTGAGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGT 138221 ||||| | |||||| | ||| ||||| || || | || || |||||||| ||||| Sbjct 3292308 AATGGAGCCAGATGTGCTTTTACGCCAATTGGGCCCATACCCGGGCCTCCACCACCATGA 3292249 Query 138222 GGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGT 138281 ||||| |||||||| || || ||||| |||||| ||||||| || | || | || Sbjct 3292248 GGAATGCAGAATGTTTTGTGCAAATTCAGATGAGATACATCGCTTCCGAAATCTCCAGGA 3292189 Query 138282 TTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTG 138341 || ||| || || || || | || || ||||| ||||||||||| ||||||| Sbjct 3292188 CGGCATAAACCCACTTGAGCGTTCATGTTGGCCCCATCCAGATATACCTGGCCACCATGT 3292129 Query 138342 TCATGAACGATCTTACATATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGA 138401 | ||| || | | || | | | || ||| || || | |||| || |||||| Sbjct 3292128 TGATGGACAAGTTCGCAAACATCTACGACGTTGTCCTCGAAAATGCCATTCGTTGATGGA 3292069 Query 138402 TATGTAATCATAATACATGAGAG 138424 || || ||||| | ||||| || Sbjct 3292068 TAGGTGATCATCAAGCATGATAG 3292046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578980776736200