Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq1662 118 2e-21 seq1930 114 2e-20 seq1902 114 2e-20 seq477 111 2e-19 >seq1662 Length=3905379 Score = 118 bits (130), Expect = 2e-21 Identities = 198/285 (69%), Gaps = 6/285 (2%) Strand=Plus/Minus Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470 |||||||||||||| ||| ||||| ||||| | || |||||||||||| || | | Sbjct 1649975 TTTCTTTGGAATCTCGTATGTAAGTATCGATAAGCAGCGAATACATTTCACTGTGCACGT 1649916 Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC---GC 18527 ||||||| || || || || | || || | | ||||||| |||| ||| || Sbjct 1649915 TTTCCATCGCAATTTGGAACCCGTAGAAGCAACGCGCCTCGGTGACCTGAACCTCCTGGC 1649856 Query 18528 TATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCA 18587 | || | ||| || | ||||| || || ||||| || | || |||||||| |||| Sbjct 1649855 T---GAACCGTTCGACGAGGTTCTCGTTCACAATACCATCGGAAGCGGCGAAAAAGGCCA 1649799 Query 18588 AAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTT 18647 |||| |||||||| || || |||||| || | ||| || | | ||||| Sbjct 1649798 GCACATGGGAGATGAAATGCTTCTCTCCGGACTTGAGCTTTTCCCAGTCGGCCAGATCTT 1649739 Query 18648 TTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCT 18692 | || ||||| ||||||||| ||||| || |||| |||||||| Sbjct 1649738 TGGAGAGATCTACTTCTTCCACCGTCCAGAAGGATGCTTCGGCCT 1649694 >seq1930 Length=1715699 Score = 114 bits (126), Expect = 2e-20 Identities = 119/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || |||| || ||||||||||||| || ||||| || |||||| || Sbjct 813758 ATGCAGATCTTCGTTAAGACCCTGACTGGAAAAACCATCACATTGGAGGTCGAACCCTCA 813817 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||| || ||| || || ||||| |||||||| |||||||| || Sbjct 813818 GATACCATTGAAAACGTCAAGGCTAAGATCCAGGATAAGGAAGGCATCCCTCCAGATCAG 813877 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 813878 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 813913 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||||||||| || ||||| |||||||||||| ||| Sbjct 812162 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACCATTACTTTAGAAGTCGAACCATCT 812221 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| |||||| || || || || ||||| ||||| || |||||||| || Sbjct 812222 GACACCATTGAAAACGTCAAGGCCAAGATCCAGGATAAGGAAGGTATTCCTCCAGATCAG 812281 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | ||||| |||||||| || ||| | | || || || || || || Sbjct 812282 CAGCGTTTGATCTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACCTTGTCGGACTACAAC 812341 Query 156003 AT 156004 || Sbjct 812342 AT 812343 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || || || || |||||| || Sbjct 813530 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACCTTGGAGGTCGAACCCTCG 813589 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | || ||||||||| ||| || || ||||| ||||| || |||||||| || Sbjct 813590 GACACCATCGAAAACGTGAAGGCTAAGATCCAGGATAAGGAAGGAATCCCTCCAGATCAG 813649 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | || ||||||||| | |||||| Sbjct 813650 CAGCGTTTGATCTTCGCTGGTAAGCAGTTGGAAGAT 813685 >seq1902 Length=3516739 Score = 114 bits (126), Expect = 2e-20 Identities = 197/285 (69%), Gaps = 6/285 (2%) Strand=Plus/Plus Query 18411 TTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGAATACATTTCAGAATGTATGC 18470 |||||||||||||| ||| ||||| ||||| | || |||||||||||| || | | Sbjct 3494916 TTTCTTTGGAATCTCGTATGTAAGTATCGATAAGCAGCGAATACATTTCACTGTGCACGT 3494975 Query 18471 TTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTCGGGATATTGAATCTC---GC 18527 ||||||| || || || || | || || | | ||||||| |||| ||| || Sbjct 3494976 TTTCCATCGCAATTTGGAACCCGTAGAAGCAACGCGCCTCGGTGACCTGAACCTCCTGGC 3495035 Query 18528 TATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGCAGATGCGAAAAATGCCA 18587 | || | ||| || | ||||| || || ||||| || | || |||||||| |||| Sbjct 3495036 T---GAACCGTTCGACGAGGTTCTCGTTCACAATACCATCGGAAGCGGCGAAAAAGGCCA 3495092 Query 18588 AAACATATTTAATGAAATGTTTTTCATTATCCTTGAGATTGTTCCATTCATCTATATCTT 18647 |||| |||||||| || || |||||| || | ||| || | | ||||| Sbjct 3495093 GCACATGGGAGATGAAATGCTTCTCTCCGGACTTGAGCTTTTCCCAGTCGGCCAGATCTT 3495152 Query 18648 TTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTCGGCCT 18692 | || ||||| ||||||||| ||||| || |||| ||||||| Sbjct 3495153 TAGAGAGATCTACTTCTTCCACCGTCCAGAAGGATGCCTCGGCCT 3495197 >seq477 Length=2976132 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || || ||||| || || ||| Sbjct 2304982 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACCTTAGAGGTTGAGCCTTCA 2304923 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||||||| ||| || || ||||| ||||| || |||||||| || Sbjct 2304922 GATACTATTGAAAACGTGAAGGCTAAGATCCAGGATAAGGAAGGTATCCCTCCAGATCAG 2304863 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 2304862 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 2304827 Score = 105 bits (116), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || || ||||| || || || Sbjct 2304526 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACCTTAGAGGTTGAGCCCTCA 2304467 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| ||||||||| ||| || || ||||| ||||| || |||||||| || Sbjct 2304466 GATACTATTGAAAACGTGAAGGCTAAGATCCAGGATAAGGAAGGTATCCCTCCAGATCAG 2304407 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 2304406 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 2304371 Score = 104 bits (114), Expect = 3e-17 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||| || | || || ||||| || || || || || || |||||||| ||| Sbjct 2303158 ATGCAAATCTTCGTCAAGACCTTGACCGGCAAGACCATCACCTTGGAAGTCGAGCCTTCG 2303099 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||| || ||| || |||||||||||||| || |||||||| || Sbjct 2303098 GATACCATTGAAAACGTCAAGGCTAAGATCCAAGATAAAGAAGGTATCCCTCCAGATCAG 2303039 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | ||||| |||||| | |||||| | | || |||| || || || Sbjct 2303038 CAGCGTTTGATCTTCGCCGGAAAGCAGTTGGAAGATGGCCGCACCCTATCGGACTACAAC 2302979 Query 156003 AT 156004 || Sbjct 2302978 AT 2302977 Score = 98.7 bits (108), Expect = 1e-15 Identities = 116/157 (74%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || || | || || |||| || ||||| || || || || |||||| || Sbjct 2303387 AATGCAGATTTTCGTCAAGACCCTGACCGGTAAAACCATCACCTTGGAGGTCGAACCCTC 2303328 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| |||||||| || || |||||||| |||||||| |||||||| || Sbjct 2303327 GGATACCATTGAGAACGTGAAGGCCAAGATCCAAGATAAGGAAGGCATCCCTCCAGATCA 2303268 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || | ||||| | |||||||||||||| |||||| Sbjct 2303267 GCAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGAT 2303231 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || ||||||||||| || || || || || || ||| || Sbjct 2304754 ATGCAGATCTTCGTCAAGACCTTGACTGGAAAGACCATCACCTTGGAGGTTGAACCCTCG 2304695 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| ||| |||||| || ||| || |||||||| ||||| || |||||||| || Sbjct 2304694 GATACCATTGAAAACGTCAAGGCTAAGATCCAAGATAAGGAAGGTATCCCTCCAGATCAG 2304635 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | ||||| |||||| | |||||| | | || | || || || ||| Sbjct 2304634 CAGCGTTTGATCTTCGCCGGCAAGCAGTTGGAAGATGGCCGCACCCTGTCGGACTACAAT 2304575 Query 156003 AT 156004 || Sbjct 2304574 AT 2304573 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||||||||| ||||| || || || |||||| || Sbjct 2305438 ATGCAGATCTTCGTCAAGACCCTGACTGGAAAGACTATCACTTTGGAGGTCGAACCATCG 2305379 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | ||| ||| || || ||| || || ||||| ||||| || |||||||| || Sbjct 2305378 GACACCATTGAAAATGTCAAGGCTAAGATCCAGGATAAGGAAGGTATCCCTCCAGATCAG 2305319 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || | ||||| | |||||||||||||| |||||| | | || | || || ||||| Sbjct 2305318 CAGCGTTTGATCTTCGCCGGTAAGCAGCTGGAAGATGGCCGCACCCTGTCGGACTATAAC 2305259 Query 156003 AT 156004 || Sbjct 2305258 AT 2305257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731849723646000