Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq201 187 2e-42 seq163 187 2e-42 >seq201 Length=4001547 Score = 187 bits (206), Expect = 2e-42 Identities = 172/218 (79%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||| ||||| ||| || || || ||||||||||| || |||||||| || || || | Sbjct 1875406 TTGTGATCGAACTGAGTCTGAGCTCCCAGCTCGCAACCAAAGTACTTGGTTGGATAGGTT 1875465 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 |||||||| || | || || | |||| |||||| || ||||| |||||||||||| Sbjct 1875466 GCCGGACGGCCGATGGCACGTGCCACGTCGGCCATGTTCACAATGACCGTCTTGATGCCG 1875525 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || |||||||||||||||||||| ||| || ||||| ||||| ||||||||| | ||| Sbjct 1875526 TTACCCTTTCCTTCGACCTTGGCATTGATCCGGGGCATCTTGTAACGGTAGAACACATCC 1875585 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGC 34649 |||||||| ||||| ||||| || || ||||| |||| Sbjct 1875586 GCCACATTACGGTTGACGTTAACGGTACCCATGATGGC 1875623 Score = 136 bits (150), Expect = 3e-27 Identities = 162/219 (74%), Gaps = 1/219 (0%) Strand=Plus/Plus Query 34219 ATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAACCGCATGCTTTGCAG 34278 ||||||||||| | |||||| || | | || ||||| | ||||| |||||||| Sbjct 1874962 ATGAAGGTGTTAACCTTATGGTTGACCTCCAACGGACCGTGGAATCCGCACGCTTTGCAA 1875021 Query 34279 CCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGTCTCCGGGTTGTCACAT 34338 ||||| | || | ||| || | || ||||| || || || || || || ||||| Sbjct 1875022 CCCTGCGAAATGGTACCCTTCTTCGACGATACGATCAGATCGGTTTCGGGATTATCACAC 1875081 Query 34339 TCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAG 34398 |||||||| | ||||||||||||||||||||||| || |||||||| | ||| || | Sbjct 1875082 TCCGGACAGAGGACAAACTTGCGGATGAAACCATCCAGTAGGTCCTGCAGCTTGTTGGCG 1875141 Query 34399 TCGTGGGAGCCGTTGACGATGAATCGTTCGTTNTTGTAA 34437 |||||||| || |||||||| || || || || ||||| Sbjct 1875142 TCGTGGGACCCATTGACGATAAAGCGCTCATTC-TGTAA 1875179 >seq163 Length=3874605 Score = 187 bits (206), Expect = 2e-42 Identities = 172/218 (79%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 34432 TTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATG 34491 |||| ||||| ||| || || || ||||||||||| || |||||||| || || || | Sbjct 3625987 TTGTGATCGAACTGAGTCTGAGCTCCCAGCTCGCAACCAAAGTACTTGGTTGGATAGGTT 3625928 Query 34492 GCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCG 34551 |||||||| || | || || | |||| |||||| || ||||| |||||||||||| Sbjct 3625927 GCCGGACGGCCGATGGCACGTGCCACGTCGGCCATGTTCACAATGACCGTCTTGATGCCG 3625868 Query 34552 TTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCC 34611 || |||||||||||||||||||| ||| || ||||| ||||| ||||||||| | ||| Sbjct 3625867 TTACCCTTTCCTTCGACCTTGGCATTGATCCGGGGCATCTTGTAACGGTAGAACACATCC 3625808 Query 34612 GCCACATTGCGGTTAACGTTCACAGTCCCCATCGTGGC 34649 |||||||| ||||| ||||| || || ||||| |||| Sbjct 3625807 GCCACATTACGGTTGACGTTAACGGTACCCATGATGGC 3625770 Score = 138 bits (152), Expect = 9e-28 Identities = 172/235 (73%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 34203 CGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATA 34262 ||| || || || | ||||||||||| | |||||| || | | || ||||| | Sbjct 3626447 CGGTGGATTCTTAATGATGAAGGTGTTAACCTTATGGTTGACCTCCAACGGACCGTGGAA 3626388 Query 34263 ACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| |||||||| ||||| | || | ||| || | || ||||| || || || Sbjct 3626387 TCCGCACGCTTTGCAACCCTGCGAAATGGTACCCTTCTTCGACGATACGATCAGATCGGT 3626328 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAGGTC 34382 || || || ||||| |||||||| | ||||||||||||||||||||||| || ||||| Sbjct 3626327 TTCGGGATTATCACACTCCGGACAGAGGACAAACTTGCGGATGAAACCATCCAGTAGGTC 3626268 Query 34383 CTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTNTTGTAA 34437 ||| | ||| || ||||||||| || |||||||| || || || || ||||| Sbjct 3626267 CTGCAGCTTGTTGGCGTCGTGGGATCCATTGACGATAAAGCGCTCATTC-TGTAA 3626214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412829348280455