Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq1743 95.1 2e-14 >seq1743 Length=5597386 Score = 95.1 bits (104), Expect = 2e-14 Identities = 86/107 (80%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 23054 TCATGGGGATGAATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCtttttttCC 23113 |||||| |||| ||| || ||||||||||| ||| ||||| | |||||||| |||| ||| Sbjct 1576245 TCATGGAGATGGATACAAATTTGATGGTCCGGGTAAAATTCTGGCTCATGCGTTTTATCC 1576304 Query 23114 TGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAACT 23160 |||||||| | ||||| ||||| ||||| || | || || ||||| Sbjct 1576305 CGGTACTGGCATTGGAGGTGATGCCCATTTCGA-TGAGGAGGAAACT 1576350 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635158266781800