Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_023615.1 Length=196456 Score E Sequences producing significant alignments: (Bits) Value seq1743 98.7 1e-15 seq998 84.2 3e-11 >seq1743 Length=5597386 Score = 98.7 bits (108), Expect = 1e-15 Identities = 87/109 (80%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 22383 TCACGGAGATGGATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCTTTTTTCCC 22442 ||| ||||||||||| || ||||||||||| ||| ||||| | |||||||| |||| || Sbjct 1576245 TCATGGAGATGGATACAAATTTGATGGTCCGGGTAAAATTCTGGCTCATGCGTTTTATCC 1576304 Query 22443 TGGTACTGGAAGAGGAGGAGATGCTCATTTTGATTTAGAAGAAAATTGG 22491 |||||||| | ||||| ||||| ||||| ||| || |||| |||| Sbjct 1576305 CGGTACTGGCATTGGAGGTGATGCCCATTTCGATGAGGAGGAAACTTGG 1576353 >seq998 Length=372346 Score = 84.2 bits (92), Expect = 3e-11 Identities = 75/94 (80%), Gaps = 0/94 (0%) Strand=Plus/Plus Query 22383 TCACGGAGATGGATATAATTTTGATGGTCCAGGTCAAATTTTAGCTCATGCTTTTTTCCC 22442 ||| ||||||||||| || ||||| ||||| ||| ||||| | || ||||| |||| || Sbjct 279572 TCATGGAGATGGATACAAATTTGACGGTCCGGGTAAAATTCTGGCCCATGCGTTTTATCC 279631 Query 22443 TGGTACTGGAAGAGGAGGAGATGCTCATTTTGAT 22476 |||||||| | ||||| ||||| ||||| ||| Sbjct 279632 AGGTACTGGCATTGGAGGTGATGCCCATTTCGAT 279665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628512069081600