Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq1400 105 1e-17 seq1371 98.7 2e-15 >seq1400 Length=7880666 Score = 105 bits (116), Expect = 1e-17 Identities = 154/214 (72%), Gaps = 3/214 (1%) Strand=Plus/Plus Query 183009 AACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCA 183068 ||| |||||| ||||||||| | | || || || ||| | | ||||| |||||||| Sbjct 4958645 AACCCATGACGATCTATGGAACTCGGCGCAGATCCAAATGGTCAAGGAAGGCAAAATGCA 4958704 Query 183069 TAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGA 183128 |||| | || ||||||||||| || ||||| || || ||||||| ||||||||| || Sbjct 4958705 CGGTTTCCTTCGCATGTACTGGGCGAAGAAGATTCTCGAGTGGACAAAAACTCCGGAGGA 4958764 Query 183129 TGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTA 183187 ||| || | | | ||||| | ||| || ||| | || ||||| || || | Sbjct 4958765 AGCTCTG-GAGACGGCGATCTACCTCAACGATCGCTACCAGCTGGACGGCCGAGACCCAA 4958823 Query 183188 ACGGATACGTAGGTTGTATGTGGTCTATTTGCGG 183221 | |||||||| || || |||||||| | |||||| Sbjct 4958824 ATGGATACGTTGGCTGCATGTGGTCCA-TTGCGG 4958856 >seq1371 Length=8723579 Score = 98.7 bits (108), Expect = 2e-15 Identities = 208/305 (68%), Gaps = 4/305 (1%) Strand=Plus/Minus Query 183009 AACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCA 183068 ||| |||||| ||||||||| | | || || || ||| | | |||||| |||||||| Sbjct 8603793 AACCCATGACGATCTATGGAACTCGGCGCAGATCCAAATGGTCAAAGAAGGCAAAATGCA 8603734 Query 183069 TAGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGAAGA 183128 |||| | || ||||||||||| || ||||| || || ||||| | ||||||||| || Sbjct 8603733 CGGTTTCCTTCGCATGTACTGGGCGAAGAAGATTCTCGAGTGGACTAAAACTCCGGAGGA 8603674 Query 183129 TGCTTTGAGTTATAG-TATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTA 183187 || || | | | || || | ||| || ||| | || ||||| || || | Sbjct 8603673 AGCCCTG-GAGACGGCGATTTACCTCAACGATCGCTACCAGCTGGACGGCCGAGACCCAA 8603615 Query 183188 ACGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGA-TAGAGCGTGGAAAGAA 183246 | |||||||| || || |||||||| ||| || | || || || || ||| ||| Sbjct 8603614 ATGGATACGTTGGCTGCATGTGGTCCATTGCGGGCATCCATGACCAGGGC-TGGCGTGAA 8603556 Query 183247 AGACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGAT 183306 | | || ||||| || | || ||||| ||||| | | |||| ||| || ||| Sbjct 8603555 CGGGAAGTGTTCGGAAAAATCCGCTACATGAACTATGAAGGATGTAAGCGGAAGTTCGAT 8603496 Query 183307 GTTGC 183311 ||||| Sbjct 8603495 GTTGC 8603491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903383702421600