Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1902 96.9 3e-15 seq1662 93.3 3e-14 >seq1902 Length=3516739 Score = 96.9 bits (106), Expect = 3e-15 Identities = 176/249 (71%), Gaps = 9/249 (4%) Strand=Plus/Minus Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097 ||||| ||||| || || | |||| || | | || | |||||||||||||| || || Sbjct 3490544 TTGTTCAATGCCATCGATAATCTACCCTGTG-TGAAGAAGAAAGCAGACTGGGCGCTGAA 3490486 Query 44098 ATGGATAA--ATTCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGA 44154 ||||| | | | | | | ||||||||| || | ||||| ||||| | ||||| Sbjct 3490485 CTGGATCTCCAGTAAGCAGGCTAATTTTGGAGAGCGCGTGGTCGCCTTTGCCGCCGTGGA 3490426 Query 44155 AGGCATTTTCTTTTCAG-GATCG-TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 |||||| ||||| ||| | | | |||||| ||||||||||| | ||||| || || || Sbjct 3490425 AGGCATCTTCTT--CAGCGGTAGCTTTGCGTCCATATTTTGGCTCAAGAAGCGCGGCCTG 3490368 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGAT 44272 ||||| || | || || || || ||| | || ||||| || ||| |||| || Sbjct 3490367 ATGCCCGGCCTTACTTTCTCCAACGAGCTGATCTCCCGTGACGAGGGCCTACACACGGAC 3490308 Query 44273 TTTGCTTGC 44281 ||||||||| Sbjct 3490307 TTTGCTTGC 3490299 >seq1662 Length=3905379 Score = 93.3 bits (102), Expect = 3e-14 Identities = 175/249 (70%), Gaps = 9/249 (4%) Strand=Plus/Plus Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097 ||||| ||||| || || | |||| || | | || | |||||||||||||| || || Sbjct 1651528 TTGTTCAATGCCATCGATAATCTACCCTGTG-TGAAGAAGAAAGCAGACTGGGCGCTGAA 1651586 Query 44098 ATGGATAA--ATTCAA-ATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGA 44154 ||||| | | | | | | ||||||||| || | ||||| || || | ||||| Sbjct 1651587 CTGGATCTCCAGTAAGCAGGCTAATTTTGGAGAGCGCGTGGTCGCCTTCGCCGCCGTGGA 1651646 Query 44155 AGGCATTTTCTTTTCAG-GATCG-TTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 |||||| ||| ||||| | | | |||||| ||||||||||| | ||||| || || || Sbjct 1651647 AGGCATCTTC--TTCAGCGGTAGCTTTGCGTCCATATTTTGGCTCAAGAAGCGCGGCCTG 1651704 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGAT 44272 ||||| || | || || || || ||| | || ||||| || ||| |||| || Sbjct 1651705 ATGCCCGGCCTTACTTTCTCCAACGAGCTGATCTCCCGTGACGAGGGCCTACACACGGAC 1651764 Query 44273 TTTGCTTGC 44281 ||||||||| Sbjct 1651765 TTTGCTTGC 1651773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397444204872175