Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq95 122 1e-22 >seq95 Length=6909593 Score = 122 bits (134), Expect = 1e-22 Identities = 630/993 (63%), Gaps = 23/993 (2%) Strand=Plus/Plus Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 110766 ||| | ||| | ||||| ||||||||| | || || || || | ||||||||||| || Sbjct 5342914 GTAAACGTTGGAAGTGTACGGTTCAAAGGACTCGTTGTTGCCGAGAATTTGTGCGGTCGA 5342973 Query 110767 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTC 110826 || || ||||| || |||| | || || |||| || | | ||| || Sbjct 5342974 AGCCGTCGGCATAGGCGCCAAAAGCAGCGAATTGCGAACTCCGTGTTTGGCGATCTTATC 5343033 Query 110827 CTTGAGAACATCCCAGTCGTAGTTGAGCT-TGGTTTCACCTTCCCACATGTCAAACTGAA 110885 || | | | ||||||| | | || ||| ||| | |||||||||| |||| | Sbjct 5343034 TTTTAAAGCGGCCCAGTCCCACAA-ATCTGTGGGTTCCTTATTCCACATGTCATACTGTA 5343092 Query 110886 GCACCCCTTGG--GACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGC 110943 | | ||||| | ||| |||| |||| || | ||||| || | |||| ||| || Sbjct 5343093 GAATCCCTTTGCTGAC-CGGGC-AACCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGC 5343150 Query 110944 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 111003 || ||| ||||| ||||| |||| | | || || || || || || | || | Sbjct 5343151 CAGTTCGCAGCTGGCCTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAG 5343210 Query 111004 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 111063 || || |||||| || || | | || || || ||| || |||| || | || Sbjct 5343211 CTTCTGGGCTTCTTCGCTGTCGTAAGGATAACGCATCAGAATGAACGCATCGGCCATTCC 5343270 Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120 || || || | ||||| || | ||| ||||| || ||| ||| | ||| || Sbjct 5343271 CTGGACGCCAATTCCAATCGGGCGGTGACGCATGTTGGAC---CGCTTGGCCTCCGGCAC 5343327 Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180 ||||| ||||| |||| |||| | ||| ||||| ||||| || | || | | ||| Sbjct 5343328 CGGATAGAAATTGATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTC 5343387 Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC--TTCATTGACATACTTTGGAAGGGCG 111238 | | ||| | | || | || | ||| |||| |||| || | ||| Sbjct 5343388 TTTCAATTTCTGGAAGTCGTATGT-CTTGTCGGGTTTCACGAACATGTTT----AACGCG 5343442 Query 111239 ATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTA 111298 || || |||| ||||||||| || | |||||||| | ||| || | ||| || || Sbjct 5343443 ATAGACGCCAGATTGCAAACGGCAATTTCATCCTTTGAGGAGTATTCCACAATCTCAGTG 5343502 Query 111299 CATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCA 111358 || ||||| |||| ||| || || || | ||| | |||||| ||||| ||||| || Sbjct 5343503 CACAAGTTCGAACACTTGATGGTGCCGATATTTTGTTGGTTGCTCTTTCGATTGCAAGCG 5343562 Query 111359 TCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAA 111418 || |||||||||||||| || || || || || || | | ||| || ||| Sbjct 5343563 TCTTTGTAGAGCATGTATGGAACTCCGGTTTCAACTTGAGACTCAATAATCGCAAACCAC 5343622 Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGG 111478 | ||| |||| || || | || |||||| ||||| ||||| |||||| | Sbjct 5343623 AAATCCTGGGCTTTCACCTTGCGGATGAACCGTCCTTCCGCTTCGTAGGATGTGTACAAT 5343682 Query 111479 GCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGA 111538 |||||| || || ||| || || || | || || | | || || | | Sbjct 5343683 TTTTCAAATTCGTCGCCCCACGTATCCGATAAGCCAGGACATTCATGCGGGCACATCAAG 5343742 Query 111539 GACCATTGACCACCTT--CCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596 |||| | | | || | || || || |||||||| || || ||||||||||| | Sbjct 5343743 CACCA--GTCTTCGTTGGCTTCCACTCGTTTCATGAACAGATCCGGAATCCACAGCGCGT 5343800 Query 111597 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 111656 | || | || ||| || | ||||| | ||| ||| | || || ||||||| Sbjct 5343801 AGAACATGTCCCTAGCTCGGACATCTTCCGCGCCTGTGTTCTTTTTCAAATCCAGGAACT 5343860 Query 111657 CCATGATATCCGCGTGCCATGGCTCAAGATAGA 111689 | | | ||| | ||||| ||||| ||||||| Sbjct 5343861 CGAACACATCTCCATGCCACGGCTCGAGATAGA 5343893 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628012884276000