Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq432 111 2e-19 seq175 109 7e-19 seq95 104 3e-17 >seq432 Length=3773907 Score = 111 bits (122), Expect = 2e-19 Identities = 265/396 (67%), Gaps = 6/396 (2%) Strand=Plus/Minus Query 11817 TCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAGACGCCCTTCTATCCA 11876 ||||| ||| || || || |||| | ||||| |||||| |||| || |||||||| Sbjct 620336 TCGGAACTGTACGGAAAGGTCGTGGAAACGCCACAGAATGAGAAGACACCGTTCTATCCG 620277 Query 11877 CGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGTGAAGAATTACCGAGA 11935 ||||| |||| | | | ||| | | |||| | ||| | |||| || || || || Sbjct 620276 CGATCTCCGTATGCCTGCGCCAAGATGTACGGCT-ACTGGATTGTGATCAACTATCGGGA 620218 Query 11936 ATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAGTCACCCCGTCGTGG 11995 | | || || | ||||| ||| ||| || || |||||||||||||| ||||| || || Sbjct 620217 AGCATACGGGATGTTTGCCTGCAATGGGATCCTGTTCAACCACGAGTCGCCCCGGCGAGG 620158 Query 11996 CCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACAAATCGTGGCGGGTGAG 12053 | | | |||||||| | ||| | ||| | ||| | | |||| | | | Sbjct 620157 CGAGAACTTCGTGACGAGGAAAGTTACCCGGTCGGTGGCGA--AAATTTCGCTCAATCAA 620100 Query 12054 AGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACATGCCAAGGAC 12113 | ||| | | | || |||| || || || || || | |||||||| || || ||||| Sbjct 620099 ATGGAATGCTTGGAGCTGGGAAATCTGGACTCCAAGCGAGACTGGGGTCACGCACAGGAC 620040 Query 12114 TATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCG 12173 || || || || |||||| | | || || || || || | || || || | || Sbjct 620039 TACGTGGAGGCTATGTGGATGATGCTACAGCAGCCGGAACCGCAGGATTACGTGATTGCT 619980 Query 12174 ACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209 ||||| ||| ||||| || ||||| ||||||||| Sbjct 619979 ACGGGCGAGTGTCACTCGGTAAGGGAATTCGTTGAG 619944 >seq175 Length=5193165 Score = 109 bits (120), Expect = 7e-19 Identities = 507/792 (64%), Gaps = 21/792 (3%) Strand=Plus/Minus Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 |||| ||||| || |||||| |||| ||||| || | ||||| || || || || || Sbjct 3013806 TTGGAAGTGTACGGTTCAAAGGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTC 3013747 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307 ||||| || |||| ||||| || || | || | || || || || | | Sbjct 3013746 GGCATAGGCGCCAAAAGAAGCGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAA 3013687 Query 118308 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATATCAAACTGGAGGATACC 118366 ||| ||||||| | || || || | || | |||||| ||| |||| || || || Sbjct 3013686 GCGGCCCAGTCCCACA-GATCTGTGGGTTCCTTGTTCCACATGTCATACTGTAGAATTCC 3013628 Query 118367 TTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | ||| | ||| | || || | || || |||| ||| || ||||||| |||| Sbjct 3013627 TTTGCTGAC-CGGGCAA-CCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCG 3013570 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 |||| || || ||||| | | || ||||| || ||||| | || | || | Sbjct 3013569 CAGCTGGCTTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGG 3013510 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGAC 118543 || || ||| || | | || ||| || ||| || |||| || | || ||||| Sbjct 3013509 GCTTCTTCGCTGTCGTAAG-GATAACGCATCAGAATGAACGCATCGGCCATTCCCTGGAC 3013451 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATA 118600 || | ||||| ||||| || | ||| || ||| || || |||| || ||||| Sbjct 3013450 GCCAATTCCAATCGGGCGGTGGCGCATGTTGGAC---CGTTTGGCCTCCGGCACCGGATA 3013394 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 ||||| | ||||| | | || ||||| |||||| || || | | ||| | || Sbjct 3013393 GAAATTGATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAG 3013334 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCTC--TTCATTGACATACTTAGGAAGGGCGATTGAC 118718 || | | | || | | | ||| |||| |||| ||| ||||| ||| Sbjct 3013333 TTTCTGGAAGTCGTATGT-CTTGTCGGGTTTCACGAACATGTTTAAC----GCGATAGAC 3013279 Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 |||||||| || || | | ||||| || | ||| || | ||||| ||||||| | Sbjct 3013278 GCCAGATTGCAAACGGCAATTTCATCTTTTGAGGAGTATTCCACGATTTCGGTGCACAGG 3013219 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || |||| ||| |||||||| | ||| | || || |||| ||| || || ||||| Sbjct 3013218 TTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTCTTTCGGTTGCAAGCGTCCTTA 3013159 Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898 || ||||||||||| || || || |||||| | | ||| || ||| | ||| Sbjct 3013158 TATAGCATGTATGGAACTCCGGTTTCAACTTGGGATTCAATAATCGCGAACCACAGATCT 3013099 Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958 ||| ||| || | || || || || | ||||| |||||| || |||| Sbjct 3013098 TGCGCTTTCACCTTGCGGATGAACCGACCTTCCGCTTCGTAGGATGTGTACAGTTTTTCA 3013039 Query 118959 AACTCTTCACCC 118970 ||||| || ||| Sbjct 3013038 AACTCGTCGCCC 3013027 >seq95 Length=6909593 Score = 104 bits (114), Expect = 3e-17 Identities = 435/674 (65%), Gaps = 21/674 (3%) Strand=Plus/Plus Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247 |||| ||||| || |||||| |||| ||||| || | ||||| || || || || || Sbjct 5342921 TTGGAAGTGTACGGTTCAAAGGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTC 5342980 Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307 ||||| || |||| || || || || | || | || || || || | | Sbjct 5342981 GGCATAGGCGCCAAAAGCAGCGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAA 5343040 Query 118308 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATATCAAACTGGAGGATACC 118366 ||| ||||||| | | || || | || | |||||| ||| |||| || || || Sbjct 5343041 GCGGCCCAGTCCCACAA-ATCTGTGGGTTCCTTATTCCACATGTCATACTGTAGAATCCC 5343099 Query 118367 TTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424 || | ||| | ||| | || || | || || |||| ||| || ||||||| |||| Sbjct 5343100 TTTGCTGAC-CGGGCAA-CCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCG 5343157 Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484 |||| ||||| ||||| | | || ||||| || ||||| | || | || | Sbjct 5343158 CAGCTGGCCTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGG 5343217 Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGAC 118543 || || ||| || | | || ||| || ||| || |||| || | || ||||| Sbjct 5343218 GCTTCTTCGCTGTCGTAAG-GATAACGCATCAGAATGAACGCATCGGCCATTCCCTGGAC 5343276 Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATA 118600 || | ||||| ||||| || | ||| || ||| || || |||| || ||||| Sbjct 5343277 GCCAATTCCAATCGGGCGGTGACGCATGTTGGAC---CGCTTGGCCTCCGGCACCGGATA 5343333 Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660 ||||| | ||||| | | || ||||| |||||| || || | | ||| | | Sbjct 5343334 GAAATTGATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAA 5343393 Query 118661 CTTTTCGTAATCAAAACTGCGAGTCTC--TTCATTGACATACTTAGGAAGGGCGATTGAC 118718 || | | | || | | | ||| |||| |||| ||| ||||| ||| Sbjct 5343394 TTTCTGGAAGTCGTATGT-CTTGTCGGGTTTCACGAACATGTTTAAC----GCGATAGAC 5343448 Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778 |||||||| || || | | |||||||| | ||| || | ||| || ||||||||| Sbjct 5343449 GCCAGATTGCAAACGGCAATTTCATCCTTTGAGGAGTATTCCACAATCTCAGTGCACAAG 5343508 Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838 || |||| ||| |||||||| | || | ||| || |||| || || || || ||| Sbjct 5343509 TTCGAACACTTGATGGTGCCGATATTTTGTTGGTTGCTCTTTCGATTGCAAGCGTCTTTG 5343568 Query 118839 TAAAGCATGTATGG 118852 || ||||||||||| Sbjct 5343569 TAGAGCATGTATGG 5343582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618416376378600