Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09]
2,435 sequences; 2,247,306,217 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq432 111 2e-19
seq175 109 7e-19
seq95 104 3e-17
>seq432
Length=3773907
Score = 111 bits (122), Expect = 2e-19
Identities = 265/396 (67%), Gaps = 6/396 (2%)
Strand=Plus/Minus
Query 11817 TCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAGACGCCCTTCTATCCA 11876
||||| ||| || || || |||| | ||||| |||||| |||| || ||||||||
Sbjct 620336 TCGGAACTGTACGGAAAGGTCGTGGAAACGCCACAGAATGAGAAGACACCGTTCTATCCG 620277
Query 11877 CGATCCGTCTATGGCGTCTCAAAGGT-TGCGGCACATTGGCTCGTGAAGAATTACCGAGA 11935
||||| |||| | | | ||| | | |||| | ||| | |||| || || || ||
Sbjct 620276 CGATCTCCGTATGCCTGCGCCAAGATGTACGGCT-ACTGGATTGTGATCAACTATCGGGA 620218
Query 11936 ATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAGTCACCCCGTCGTGG 11995
| | || || | ||||| ||| ||| || || |||||||||||||| ||||| || ||
Sbjct 620217 AGCATACGGGATGTTTGCCTGCAATGGGATCCTGTTCAACCACGAGTCGCCCCGGCGAGG 620158
Query 11996 CCCGGATTTCGTGACAAAGAAGATCACC--GATGGTATCAAACAAATCGTGGCGGGTGAG 12053
| | | |||||||| | ||| | ||| | ||| | | |||| | | |
Sbjct 620157 CGAGAACTTCGTGACGAGGAAAGTTACCCGGTCGGTGGCGA--AAATTTCGCTCAATCAA 620100
Query 12054 AGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGGACATGCCAAGGAC 12113
| ||| | | | || |||| || || || || || | |||||||| || || |||||
Sbjct 620099 ATGGAATGCTTGGAGCTGGGAAATCTGGACTCCAAGCGAGACTGGGGTCACGCACAGGAC 620040
Query 12114 TATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCG 12173
|| || || || |||||| | | || || || || || | || || || | ||
Sbjct 620039 TACGTGGAGGCTATGTGGATGATGCTACAGCAGCCGGAACCGCAGGATTACGTGATTGCT 619980
Query 12174 ACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAG 12209
||||| ||| ||||| || ||||| |||||||||
Sbjct 619979 ACGGGCGAGTGTCACTCGGTAAGGGAATTCGTTGAG 619944
>seq175
Length=5193165
Score = 109 bits (120), Expect = 7e-19
Identities = 507/792 (64%), Gaps = 21/792 (3%)
Strand=Plus/Minus
Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247
|||| ||||| || |||||| |||| ||||| || | ||||| || || || || ||
Sbjct 3013806 TTGGAAGTGTACGGTTCAAAGGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTC 3013747
Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307
||||| || |||| ||||| || || | || | || || || || | |
Sbjct 3013746 GGCATAGGCGCCAAAAGAAGCGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAA 3013687
Query 118308 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATATCAAACTGGAGGATACC 118366
||| ||||||| | || || || | || | |||||| ||| |||| || || ||
Sbjct 3013686 GCGGCCCAGTCCCACA-GATCTGTGGGTTCCTTGTTCCACATGTCATACTGTAGAATTCC 3013628
Query 118367 TTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424
|| | ||| | ||| | || || | || || |||| ||| || ||||||| ||||
Sbjct 3013627 TTTGCTGAC-CGGGCAA-CCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCG 3013570
Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484
|||| || || ||||| | | || ||||| || ||||| | || | || |
Sbjct 3013569 CAGCTGGCTTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGG 3013510
Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGAC 118543
|| || ||| || | | || ||| || ||| || |||| || | || |||||
Sbjct 3013509 GCTTCTTCGCTGTCGTAAG-GATAACGCATCAGAATGAACGCATCGGCCATTCCCTGGAC 3013451
Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATA 118600
|| | ||||| ||||| || | ||| || ||| || || |||| || |||||
Sbjct 3013450 GCCAATTCCAATCGGGCGGTGGCGCATGTTGGAC---CGTTTGGCCTCCGGCACCGGATA 3013394
Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660
||||| | ||||| | | || ||||| |||||| || || | | ||| | ||
Sbjct 3013393 GAAATTGATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAG 3013334
Query 118661 CTTTTCGTAATCAAAACTGCGAGTCTC--TTCATTGACATACTTAGGAAGGGCGATTGAC 118718
|| | | | || | | | ||| |||| |||| ||| ||||| |||
Sbjct 3013333 TTTCTGGAAGTCGTATGT-CTTGTCGGGTTTCACGAACATGTTTAAC----GCGATAGAC 3013279
Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778
|||||||| || || | | ||||| || | ||| || | ||||| ||||||| |
Sbjct 3013278 GCCAGATTGCAAACGGCAATTTCATCTTTTGAGGAGTATTCCACGATTTCGGTGCACAGG 3013219
Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838
|| |||| ||| |||||||| | ||| | || || |||| ||| || || |||||
Sbjct 3013218 TTCGAACACTTGATGGTGCCGATGTTTTGCTGGTTGCTCTTTCGGTTGCAAGCGTCCTTA 3013159
Query 118839 TAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCG 118898
|| ||||||||||| || || || |||||| | | ||| || ||| | |||
Sbjct 3013158 TATAGCATGTATGGAACTCCGGTTTCAACTTGGGATTCAATAATCGCGAACCACAGATCT 3013099
Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTGTAGAGGGCTTCA 118958
||| ||| || | || || || || | ||||| |||||| || ||||
Sbjct 3013098 TGCGCTTTCACCTTGCGGATGAACCGACCTTCCGCTTCGTAGGATGTGTACAGTTTTTCA 3013039
Query 118959 AACTCTTCACCC 118970
||||| || |||
Sbjct 3013038 AACTCGTCGCCC 3013027
>seq95
Length=6909593
Score = 104 bits (114), Expect = 3e-17
Identities = 435/674 (65%), Gaps = 21/674 (3%)
Strand=Plus/Plus
Query 118188 TTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTG 118247
|||| ||||| || |||||| |||| ||||| || | ||||| || || || || ||
Sbjct 5342921 TTGGAAGTGTACGGTTCAAAGGACTCGTTGTTGCCGAGAATTTGTGCGGTCGAAGCCGTC 5342980
Query 118248 GGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGA 118307
||||| || |||| || || || || | || | || || || || | |
Sbjct 5342981 GGCATAGGCGCCAAAAGCAGCGAATTGCGAACTCCGTGTTTGGCGATCTTATCTTTTAAA 5343040
Query 118308 GCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCC-TGCCACATATCAAACTGGAGGATACC 118366
||| ||||||| | | || || | || | |||||| ||| |||| || || ||
Sbjct 5343041 GCGGCCCAGTCCCACAA-ATCTGTGGGTTCCTTATTCCACATGTCATACTGTAGAATCCC 5343099
Query 118367 TTGG--GACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCG 118424
|| | ||| | ||| | || || | || || |||| ||| || ||||||| ||||
Sbjct 5343100 TTTGCTGAC-CGGGCAA-CCAGCATAAGTTTCGTATGTGCCTTCTTTTTCCGCCAGTTCG 5343157
Query 118425 GAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTG 118484
|||| ||||| ||||| | | || ||||| || ||||| | || | || |
Sbjct 5343158 CAGCTGGCCTCAAGGGCACCATAGTAGATTGTCTCGAAAATCTGTTGGTTTAGCTTCTGG 5343217
Query 118485 GCCTCGTCGGAATCAAACGCGAGTCGGCA-CAAAATAAATACATCCGCGAGACCTTGGAC 118543
|| || ||| || | | || ||| || ||| || |||| || | || |||||
Sbjct 5343218 GCTTCTTCGCTGTCGTAAG-GATAACGCATCAGAATGAACGCATCGGCCATTCCCTGGAC 5343276
Query 118544 ACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC---ACGGGATA 118600
|| | ||||| ||||| || | ||| || ||| || || |||| || |||||
Sbjct 5343277 GCCAATTCCAATCGGGCGGTGACGCATGTTGGAC---CGCTTGGCCTCCGGCACCGGATA 5343333
Query 118601 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 118660
||||| | ||||| | | || ||||| |||||| || || | | ||| | |
Sbjct 5343334 GAAATTGATGTCGATGATTTTGTTGAGATTCTTGGTGGCAGTTTTGGATACTTCTTTCAA 5343393
Query 118661 CTTTTCGTAATCAAAACTGCGAGTCTC--TTCATTGACATACTTAGGAAGGGCGATTGAC 118718
|| | | | || | | | ||| |||| |||| ||| ||||| |||
Sbjct 5343394 TTTCTGGAAGTCGTATGT-CTTGTCGGGTTTCACGAACATGTTTAAC----GCGATAGAC 5343448
Query 118719 GCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAG 118778
|||||||| || || | | |||||||| | ||| || | ||| || |||||||||
Sbjct 5343449 GCCAGATTGCAAACGGCAATTTCATCCTTTGAGGAGTATTCCACAATCTCAGTGCACAAG 5343508
Query 118779 TTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTG 118838
|| |||| ||| |||||||| | || | ||| || |||| || || || || |||
Sbjct 5343509 TTCGAACACTTGATGGTGCCGATATTTTGTTGGTTGCTCTTTCGATTGCAAGCGTCTTTG 5343568
Query 118839 TAAAGCATGTATGG 118852
|| |||||||||||
Sbjct 5343569 TAGAGCATGTATGG 5343582
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618416376378600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |