Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq175 122 1e-22 seq1105 113 5e-20 seq95 111 2e-19 seq1107 105 8e-18 seq472 105 8e-18 seq1902 96.9 4e-15 seq1662 91.5 2e-13 >seq175 Length=5193165 Score = 122 bits (134), Expect = 1e-22 Identities = 620/979 (63%), Gaps = 21/979 (2%) Strand=Plus/Plus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 ||||||| ||||| ||||| | ||| | | |||||||| || ||| ||| || Sbjct 3012834 TCTATCTGGAGCCGTGGCATGGAGATGTGTTCGAGTTCCTGGATTTGAAAAAGAACACAG 3012893 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 | | || || | || | || | |||| ||| || |||||||| ||||| |||| Sbjct 3012894 GCGCGGAAGATGTCCGAGCTAGGGACATGTTCTACGCGCTGTGGATTCCGGATCTGTTCA 3012953 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795 |||| |||| || | | | | |||| | | || || || | ||||| Sbjct 3012954 TGAAACGAGTGGAAGCCAACGAAGACTGGTGCTTGATGTGCCCGCACGAATGTCCTGGAT 3013013 Query 104796 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC 104855 | || ||| | ||| || ||||||||| || |||||| ||||| | ||||||| Sbjct 3013014 TATCTGATACGTGGGGCGACGAGTTTGAAAAACTGTACACATCCTACGAAGCGGAAGGTC 3013073 Query 104856 GGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACC 104914 || | | || | |||| ||| ||| ||||| || ||| | | || ||| Sbjct 3013074 GGTTCA-TCCGCAAGGTGAAAGCGCAAGATCTGTGGTTCGCGATTATTGAATCCCAAGTT 3013132 Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 || || || ||||||||||| || || ||||| || |||| |||||| || || | Sbjct 3013133 GAAACCGGAGTTCCATACATGCTATATAAGGACGCTTGCAACCGAAAGAGCAACCAGCAA 3013192 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 || | || |||||| |||| || || || || |||||| |||||| | ||| Sbjct 3013193 AACATCGGCACCATCAAGTGTTCGAACCTGTGCACCGAAATCGTGGAATACTCCTCAAAA 3013252 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 ||||| | || || || || || || || ||||| | || || ||| | || || Sbjct 3013253 GATGAAATTGCCGTTTGCAATCTGGCGTCTATCGCGTTAAACATGTTCGTGAAACCCGA- 3013311 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 ||||||| || | | ||||| | ||||| | ||||||| |||||| || || Sbjct 3013312 --CAAGACATACGACTTCCAGAAACTGAAAGAAGTATCCAAAACTGCCACCAAGAATCTC 3013369 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATG 105211 |||| | | || || | ||||| || || || ||| | || || || ||| Sbjct 3013370 AACAAAATCATCGACATCAATTTCTATCCGGTGCCGGAGGCCAAACG---GTCCAACATG 3013426 Query 105212 AGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGC 105271 | ||||| || ||||| | || || ||||| | || |||| |||||||| || Sbjct 3013427 CGCCACCGCCCGATTGGAATTGGCGTCCAGGGAATGGCCGATGCGTTCATTCTGATGCGT 3013486 Query 105272 CACGCATTTGATTCCGACGAAGC---GAAG-GAAATCAATGCGCGCATATTTGAGACCAT 105327 | | | || ||| ||||| |||| ||| ||| | || || ||||| || Sbjct 3013487 TATCCTTACGACAGCGAAGAAGCCCAGAAGCTAAACCAA----CAGATTTTCGAGACAAT 3013542 Query 105328 GTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 105387 || | | || ||||| || || | || |||| || || || |||| ||||| Sbjct 3013543 CTACTATGGTGCCCTTGAAGCCAGCTGCGAACTGGCGGAAAAAGAAGGCACATACGAAAC 3013602 Query 105388 CTTTGAGGGTTCTCCAG-CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || |||| || | | || |||| | || || | ||| |||||| | || Sbjct 3013603 TTATGCTGGTTGCCCGGTCAGCA-AAGGAATTCTACAGTATGACATGTGGAACAAGGAAC 3013661 Query 105447 CCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTA 105506 ||| || | ||||||| ||| | || || ||| | | || |||| | Sbjct 3013662 CCACAGATCTGTGGGACTGGGCCGCTTTAAAAGATAAGATCGCCAAACACGGAGTTCGCA 3013721 Query 105507 ACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATG 105566 | || || |||| || ||||| || || || ||||||||||| | || || || | Sbjct 3013722 ATTCGCTTCTTTTGGCGCCTATGCCGACGGCTTCGACCGCACAAATTCTCGGCAACAACG 3013781 Query 105567 AATGCTTTGAACCCTACAC 105585 | | ||||||||| ||||| Sbjct 3013782 AGTCCTTTGAACCGTACAC 3013800 >seq1105 Length=3041613 Score = 113 bits (124), Expect = 5e-20 Identities = 275/412 (67%), Gaps = 20/412 (5%) Strand=Plus/Plus Query 9526 ATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGC 9585 ||| || || || ||||| | || || | ||| ||||| ||||| ||||| || ||||| Sbjct 1560508 ATCGAACCGTCCCGGACGCAACAGGGCCTTATCCAGGATGTCAACCCGATTGGTAGCGGC 1560567 Query 9586 GATGACAACAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAAT 9645 | || |||| ||| | | | |||||| |||||||| || ||| ||||| | Sbjct 1560568 CAGAACTACAACGTTCGTTGTAGTGTTAAAACCGTCCATCTCCACCAGAAGCTGGTTCAA 1560627 Query 9646 AGTTTGTTCCCGTTCATCATT--CGCTGGCA----TACCACCAGCACTGCGTTGCTTTCC 9699 ||| | ||| |||| || ||| | | | |||||| || | | || Sbjct 1560628 AGTGTTCTCCTGTTCCGAATGACCGCCGAAACTTTTTCCACCA------CGCTTCCGACC 1560681 Query 9700 CACGGCATCAATCTCATCAATGAAGACGATGCATGGT---TGATTTTCGCGAGCGACTTC 9756 ||||| ||||| || |||||||| | || || || || ||| ||||| | | | Sbjct 1560682 AACGGCGTCAATTTCGTCAATGAACAATATACAGGGGGCGTGCTTT---CGAGCCATTGC 1560738 Query 9757 AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGC 9816 || | ||||||||||| | || ||||||||||||||||||| || | || | Sbjct 1560739 GAACATGTCCCGTACACGGGATGGACCAACACCAACAAACATCTCCAAGAACTCTGATCC 1560798 Query 9817 GGA-ACATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCT 9875 || || | ||||||||| ||||| | |||||| || | || ||| ||||| || | Sbjct 1560799 CGACACGGT-GATGAAGGGAACATTGGCTTCACCGGCCGTCGCCTTGGCAAGAAGGGTTT 1560857 Query 9876 TACCCGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC 9927 |||| ||||| ||| ||| | || | |||||| ||| ||||| || || Sbjct 1560858 TACCGGTACCGGGCGGACCAGTCAGCATAGCACCTTTTGGGATCTTTGCTCC 1560909 >seq95 Length=6909593 Score = 111 bits (122), Expect = 2e-19 Identities = 620/980 (63%), Gaps = 23/980 (2%) Strand=Plus/Minus Query 104616 TCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAG 104675 ||||||| ||||| ||||| | ||| | | |||||||| || ||| ||| || Sbjct 5343893 TCTATCTCGAGCCGTGGCATGGAGATGTGTTCGAGTTCCTGGATTTGAAAAAGAACACAG 5343834 Query 104676 GTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCA 104735 | | || || | || | || | |||| ||| || |||||||| ||||| |||| Sbjct 5343833 GCGCGGAAGATGTCCGAGCTAGGGACATGTTCTACGCGCTGTGGATTCCGGATCTGTTCA 5343774 Query 104736 TGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTC 104795 |||| |||| || | | | | |||| | | || || | | ||||| Sbjct 5343773 TGAAACGAGTGGAAGCCAACGAAGACTGGTGCTTGATGTGCCCGCATGAATGTCCTGGCT 5343714 Query 104796 TCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTC 104855 | || ||| | ||| || || |||||| | |||||| ||||| | ||||| | Sbjct 5343713 TATCGGATACGTGGGGCGACGAATTTGAAAAATTGTACACATCCTACGAAGCGGAAGGAC 5343654 Query 104856 GGGCGACTGCG-ACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACC 104914 || | | || | |||| ||| ||| ||||| || ||| | |||||||| Sbjct 5343653 GGTTCA-TCCGCAAGGTGAAAGCCCAGGATTTGTGGTTTGCGATTATTGAGTCTCAAGTT 5343595 Query 104915 GAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAG 104974 || || || ||||||||||| ||||||||||| || || | |||||| || ||| | Sbjct 5343594 GAAACCGGAGTTCCATACATGCTCTACAAAGACGCTTGCAATCGAAAGAGCAACCAACAA 5343535 Query 104975 AATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAA 105034 ||| | || |||||| |||| || | || || || || |||||| | || Sbjct 5343534 AATATCGGCACCATCAAGTGTTCGAACTTGTGCACTGAGATTGTGGAATACTCCTCAAAG 5343475 Query 105035 GATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAG 105094 ||||| | || || || || || || || ||||| | || || ||| | || || Sbjct 5343474 GATGAAATTGCCGTTTGCAATCTGGCGTCTATCGCGTTAAACATGTTCGTGAAACCCGA- 5343416 Query 105095 ACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTA 105154 ||||||| || | | ||| | | ||||| | ||||||| |||||| || || Sbjct 5343415 --CAAGACATACGACTTCCAGAAATTGAAAGAAGTATCCAAAACTGCCACCAAGAATCTC 5343358 Query 105155 AACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAATCTAATATG 105211 |||| | | || || | ||||| || || || ||| | || || || ||| Sbjct 5343357 AACAAAATCATCGACATCAATTTCTATCCGGTGCCGGAGGCCAAGCG---GTCCAACATG 5343301 Query 105212 AGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGC 105271 | ||||| || ||||| | || || ||||| | || |||| |||||||| || Sbjct 5343300 CGTCACCGCCCGATTGGAATTGGCGTCCAGGGAATGGCCGATGCGTTCATTCTGATGCGT 5343241 Query 105272 CACGCATTTGATTCCGACGAAGC---GAAG-GAAATCAATGCGCGCATATTTGAGACCAT 105327 | | | || ||| ||||| |||| ||| ||| | || || ||||| || Sbjct 5343240 TATCCTTACGACAGCGAAGAAGCCCAGAAGCTAAACCAA----CAGATTTTCGAGACAAT 5343185 Query 105328 GTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAAC 105387 || | | || |||||||| || | || |||| || || || |||| ||||| Sbjct 5343184 CTACTATGGTGCCCTTGAGGCCAGCTGCGAACTGGCGGAAAAAGAAGGCACATACGAAAC 5343125 Query 105388 CTTTGAGGGTTCTCCAG-CTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGA 105446 | || |||| || | | || ||||| | || || | ||| |||||| | || Sbjct 5343124 TTATGCTGGTTGCCCGGTCAGCA-AAGGGATTCTACAGTATGACATGTGGAATAAGGAAC 5343066 Query 105447 CCA-AGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGT 105505 ||| || || | ||||||| ||| | || || ||| | | || |||| Sbjct 5343065 CCACAGATT-TGTGGGACTGGGCCGCTTTAAAAGATAAGATCGCCAAACACGGAGTTCGC 5343007 Query 105506 AACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 105565 || || || |||| || ||||| || || || ||||||||||| | || || || Sbjct 5343006 AATTCGCTGCTTTTGGCGCCTATGCCGACGGCTTCGACCGCACAAATTCTCGGCAACAAC 5342947 Query 105566 GAATGCTTTGAACCCTACAC 105585 || | ||||||||| ||||| Sbjct 5342946 GAGTCCTTTGAACCGTACAC 5342927 >seq1107 Length=3620151 Score = 105 bits (116), Expect = 8e-18 Identities = 175/249 (70%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516 |||||| ||||| ||||| ||||| |||||||||| ||| || |||||||| || Sbjct 318702 ATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATGTT 318761 Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACT--TCA 168574 ||| || | ||||| | ||||| |||||||| || |||| | || |||| ||| Sbjct 318762 GTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGC-ACAGGGACTGTTCA 318819 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 168634 || || ||||| || | | || ||||| | | |||| ||| || || |||| |||| Sbjct 318820 CCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTCA 318879 Query 168635 TCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCA 168694 ||| ||| | |||||| | | |||| ||||| || || ||||||||||| Sbjct 318880 CGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGACCG 318939 Query 168695 TCCGCCATG 168703 ||| ||||| Sbjct 318940 TCCACCATG 318948 >seq472 Length=3306290 Score = 105 bits (116), Expect = 8e-18 Identities = 175/249 (70%), Gaps = 4/249 (2%) Strand=Plus/Plus Query 168457 ATCCTTACCACCCATGAGACGCGTACCAAACTGACCACACGGCTCAAGAAGATTGATATT 168516 |||||| ||||| ||||| ||||| |||||||||| ||| || |||||||| || Sbjct 1650500 ATCCTTTCCACCAGAAAGACGAGTACCGAACTGACCACTCGGGATCAGCAGATTGATGTT 1650559 Query 168517 GTTTGAACCCATGTAGTCATTCGCCAACTTGACAATCGTGTCCGCGAGAGAGACT--TCA 168574 ||| || | ||||| | ||||| |||||||| || |||| | || |||| ||| Sbjct 1650560 GTTGCTTCCGACGTAGTTCTGGGCCAAATTGACAATGGTA-CCGC-ACAGGGACTGTTCA 1650617 Query 168575 CCGTGGTGGTACGCACTCTTCTCTGCGACAAATGCCGCCAACTGCGCCACTTTCATCTCA 168634 || || ||||| || | | || ||||| | | |||| ||| || || |||| |||| Sbjct 1650618 CCATGATGGTAGGCGGACATTTCAGCGACTGAACCGGCCAGCTGGGCGACCTTCACCTCA 1650677 Query 168635 TCCTTGAGATTCTTGTGGAAGCATGCGTACATAACCTTGCGTTGCGAAGGCTTGAGACCA 168694 ||| ||| | |||||| | | |||| ||||| || || ||||||||||| Sbjct 1650678 CGCTTATCATTACGCTTGAAGCACGTGAACATGACCTTTCGCTGACCGGGCTTGAGACCG 1650737 Query 168695 TCCGCCATG 168703 ||| ||||| Sbjct 1650738 TCCACCATG 1650746 >seq1902 Length=3516739 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 94809 |||||||| || ||||| |||| ||| | | ||| | | |||| ||||| Sbjct 3490508 AAGAAAGCAGACTGGGCGCTGAACTGGATCTCCAGTAAGCAGGCTAATTTTGGAGAGCGC 3490449 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTA 94868 | |||| ||||| || || || ||||||||| ||| ||| |||| | || | Sbjct 3490448 GTGGTCGCCTTTGCCGCCGTGGAAGGCATCTTCTTCAGCGGTAGCTT-TGCGTCCATATT 3490390 Query 94869 TTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCG 94928 ||||||||||||||| || || ||||| || || |||||||||||||| ||||| || Sbjct 3490389 TTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTTACTTTCTCCAACGAGCTGATCTCCCG 3490330 Query 94929 TGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||| || ||| || ||||| Sbjct 3490329 TGACGAGGGCCTACACACGGACTTTGC 3490303 >seq1662 Length=3905379 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 94750 AAGAAAGCGGATTGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGA 94809 |||||||| || ||||| |||| ||| | | ||| | | |||| ||||| Sbjct 1651564 AAGAAAGCAGACTGGGCGCTGAACTGGATCTCCAGTAAGCAGGCTAATTTTGGAGAGCGC 1651623 Query 94810 CTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-CTATTTA 94868 | |||| || || || || || ||||||||| ||| ||| |||| | || | Sbjct 1651624 GTGGTCGCCTTCGCCGCCGTGGAAGGCATCTTCTTCAGCGGTAGCTT-TGCGTCCATATT 1651682 Query 94869 TTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCG 94928 ||||||||||||||| || || ||||| || || |||||||||||||| ||||| || Sbjct 1651683 TTGGCTCAAGAAGCGCGGCCTGATGCCCGGCCTTACTTTCTCCAACGAGCTGATCTCCCG 1651742 Query 94929 TGACGAGGGACTCCACCAAGAGTTTGC 94955 ||||||||| || ||| || ||||| Sbjct 1651743 TGACGAGGGCCTACACACGGACTTTGC 1651769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583243046999400