Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq432 138 1e-27 seq175 125 8e-24 seq95 113 5e-20 seq488 96.9 4e-15 seq1107 95.1 1e-14 seq472 95.1 1e-14 seq1902 82.4 8e-11 >seq432 Length=3773907 Score = 138 bits (152), Expect = 1e-27 Identities = 267/393 (68%), Gaps = 21/393 (5%) Strand=Plus/Plus Query 124514 CTCACCCGTGCCAATCACGAAATCTTCGGGAATCGACTGCTGCAACATAAGCCACATGGC 124573 ||| ||||| |||||||| |||| | || || |||||| | ||| | |||||| || Sbjct 619971 CTCGCCCGTAGCAATCACGTAATCCTGCGGTTCCGGCTGCTGTAGCATCATCCACATAGC 620030 Query 124574 TTGGACGTAGTCCTCTGCGTGCCCCCAGTCGCGCTTGGCATCCAGGTTTCCGAGCTCGA- 124632 | |||||||||| |||||| |||||||| ||||||| ||||| ||||| ||||| | Sbjct 620031 CTCCACGTAGTCCTGTGCGTGACCCCAGTCTCGCTTGGAGTCCAGATTTCCCAGCTCCAA 620090 Query 124633 --------TTGGCTTGGCCGTCTTGTTCCACTCCGCCAAACCCAGTGTAATCTTGCGCGT 124684 || | ||| || | ||| | ||| ||| | |||| || | ||| Sbjct 620091 GCATTCCATTTGATTGAGCGAAATTTTCGCCACCG----ACC--GGGTAACTTTCCTCGT 620144 Query 124685 CACAAA---CTCGGAACCGCGTCGCTCAGACTCGTGGTTGAACAGAATGCCAGTACACGC 124741 ||| || |||| || || || ||||||||||||||||| || ||| | || || Sbjct 620145 CACGAAGTTCTCG---CCTCGCCGGGGCGACTCGTGGTTGAACAGGATCCCATTGCAGGC 620201 Query 124742 AAACATCCCGTACGACTCGCGGTAGTTTTTCGTCATCCAATACCCAAAGAGCTTGGACAC 124801 |||||||||||| | || || ||||| || ||||| || || | | ||||| Sbjct 620202 AAACATCCCGTATGCTTCCCGATAGTTGATCACAATCCAGTAGCCGTACATCTTGGCGCA 620261 Query 124802 GCCATAGGGGCTTCGGGGGTAGAATGGGGTGTTTTCATTTTGGGTAGGTTGCTGAATCTT 124861 | |||| || ||| || ||||| || || || ||||| || | | || | | ||| Sbjct 620262 GGCATACGGAGATCGCGGATAGAACGGTGTCTTCTCATTCTGTGGCGTTTCCACGACCTT 620321 Query 124862 CCCAAACATCTCCGAAGTACCCGCCTGATAGAA 124894 || ||| ||||| |||| ||||| ||||| Sbjct 620322 TCCGTACAGTTCCGATGTACTGGCCTGGTAGAA 620354 Score = 96.9 bits (106), Expect = 4e-15 Identities = 245/371 (66%), Gaps = 19/371 (5%) Strand=Plus/Plus Query 158964 CTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGTTGGAGCATGAGCCACATGGC 159023 ||| || || |||||||| | |||| || | ||||| || ||||| | |||||| || Sbjct 619971 CTCGCCCGTAGCAATCACGTAATCCTGCGGTTCCGGCTGCTGTAGCATCATCCACATAGC 620030 Query 159024 CTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCATCCATGTTCCCGAGCTCGAT 159083 ||| ||||| ||||| |||||||||||||| ||||||| |||| || || ||||| | Sbjct 620031 CTCCACGTAGTCCTGTGCGTGACCCCAGTCTCGCTTGGAGTCCAGATTTCCCAGCTCCAA 620090 Query 159084 GACTT---TTCCA------GACTTTTTCCACTCAGCCA--GACCGAGCGTGATCTTGCGC 159132 | || || | || ||||| |||| |||| | || | || | | Sbjct 620091 GCATTCCATTTGATTGAGCGAAATTTTC------GCCACCGACC--GGGTAACTTTCCTC 620142 Query 159133 GTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAATGCCGGTACAAGCG 159192 ||||| || | | || ||||| |||||| ||||| ||||| || || | || || Sbjct 620143 GTCACGAAGTTCTCGCCTCGCCGGGGCGACTCGTGGTTGAACAGGATCCCATTGCAGGCA 620202 Query 159193 AACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAAAGAGCTTGGAGACG 159252 |||| || | || || || || | |||||||| || | | ||||| | | Sbjct 620203 AACATCCCGTATGCTTCCCGATAGTTGATCACAATCCAGTAGCCGTACATCTTGGCGCAG 620262 Query 159253 CCGTATGGACTCCGAGGATAAAATGGTGTCCCCTCATTTTGAATTGGTTCCTGAACCTTT 159312 | || ||| || ||||| || |||||| |||||| || | |||| |||||| Sbjct 620263 GCATACGGAGATCGCGGATAGAACGGTGTCTTCTCATTCTGTGGCGTTTCCACGACCTTT 620322 Query 159313 CCAAACATTTC 159323 || ||| ||| Sbjct 620323 CCGTACAGTTC 620333 >seq175 Length=5193165 Score = 125 bits (138), Expect = 8e-24 Identities = 372/566 (66%), Gaps = 6/566 (1%) Strand=Plus/Plus Query 53192 TTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGCGTGTCCGTGAGACGTA 53250 || |||||||| ||| | ||||| ||||| || ||| | ||||| | | |||||| || Sbjct 3012449 TTGATGCGCGTGGCCATCGGTATTCACGGGGAAGACATCGACGCG-GCCATTGAGACATA 3012507 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 |||| || | | ||||| || ||||| |||| ||| |||| || | || Sbjct 3012508 TAACTTGCTGTCGGAGAGATACTTCACCCACGCTTCGCCTACCATGTTTGCGGCCGCAAC 3012567 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 | | |||||| | ||| |||||||||| || | |||| || || || || || Sbjct 3012568 GTGTAGGCCTCAGTTATCGTCCTGCTTCCTGTTGACCATGAGCGACGATAGCATTGAGGG 3012627 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 |||||||| ||| | || ||||||| || ||||| | | || ||||| ||| | Sbjct 3012628 TATCTACGATACGTTGAAACAGTGTGCGTTGATTTCCAAATCCGCCGGCGGTATTGGTTT 3012687 Query 53431 CCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 | ||| | | |||| ||||| || || || ||||| |||||| || || Sbjct 3012688 GAATGTGCACTG-CATCCGAGCGAAGGGAACCTACATTGCTGGGACCAACGGCATCTCCA 3012746 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | ||| | | || ||| | | || | ||| || |||||| |||||| | ||||| | Sbjct 3012747 ACGGATTGATTCCGATGTTGAGGGTGTACAATAATACGGCCAAGTACGTGGATCAGGGAG 3012806 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | ||| | || | || |||||||| || ||||||||||| | || | | | Sbjct 3012807 GCAACAAGAGGCCTGGTGCATTTGCCATCTATCTGGAGCCGTGGCATGGAGATGTGTTCG 3012866 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668 |||| || || || ||| || | ||||| | || | ||| |||| | Sbjct 3012867 AGTTCCTGGATTTGAAAAAGAACACAGGCGCGGAAGATGTCCGAGCTAGGGACATGTTCT 3012926 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||||||||| || |||||| || ||||| |||| || |||| | Sbjct 3012927 AC-GCGCTGTGGATTCCGGATCTGTTCATGAAACGAGTGGAAGCCAACGAAGACTGGTGC 3012985 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGG 53754 ||||||||||| |||| || || || Sbjct 3012986 TTGATGTGCCCGCACGAATGTCCTGG 3013011 >seq95 Length=6909593 Score = 113 bits (124), Expect = 5e-20 Identities = 370/567 (65%), Gaps = 6/567 (1%) Strand=Plus/Minus Query 53192 TTCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTAC-ACGCGTGTCCGTGAGACGTA 53250 || |||||||| ||| | ||||| ||||| || ||| | ||||| | | |||||| || Sbjct 5344278 TTGATGCGCGTGGCCATCGGTATTCACGGGGAAGACATCGACGCG-GCCATTGAGACATA 5344220 Query 53251 CGACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTAC 53310 |||| || | | ||||| || ||||| |||| ||| |||| || | || Sbjct 5344219 TAACTTGCTGTCGGAGAGATACTTCACTCACGCTTCGCCTACCATGTTTGCGGCCGCAAC 5344160 Query 53311 GAATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGG 53370 | | || ||| | ||| |||||||||| || | |||| || || || || || Sbjct 5344159 GTGTAGGCCACAGTTATCGTCCTGCTTCCTGTTGACCATGAGCGACGATAGCATTGAGGG 5344100 Query 53371 CATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTAT 53430 ||||||||| ||| | || ||||||| || ||||| | | || ||||| ||| | Sbjct 5344099 CATCTACGATACGTTGAAACAGTGTGCGTTGATTTCCAAATCCGCCGGCGGTATTGGTTT 5344040 Query 53431 CCA-CTGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCG 53489 | ||| | | |||| || || || || || || || |||||| || || Sbjct 5344039 GAATGTGCAC-TGCATCCGAGCCAAAGGAACCTACATTGCCGGAACTAACGGCATCTCCA 5343981 Query 53490 ATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTG 53549 | ||| | | || ||| | | || | ||| || ||||| |||||| | ||||| | Sbjct 5343980 ACGGATTGATTCCGATGTTGAGGGTGTACAATAATACGGCTAAGTACGTGGATCAGGGAG 5343921 Query 53550 GTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGG 53609 | ||| | || | || |||||||| |||||||||||||| | || | | | Sbjct 5343920 GCAACAAGAGGCCTGGTGCATTTGCCATCTATCTCGAGCCGTGGCATGGAGATGTGTTCG 5343861 Query 53610 AGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-T 53668 |||| || || || ||| || | ||||| | || | ||| |||| | Sbjct 5343860 AGTTCCTGGATTTGAAAAAGAACACAGGCGCGGAAGATGTCCGAGCTAGGGACATGTTCT 5343801 Query 53669 ACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTAC 53728 || || |||||||||||||| || |||||| || ||||| |||| || |||| | Sbjct 5343800 AC-GCGCTGTGGATTCCGGATCTGTTCATGAAACGAGTGGAAGCCAACGAAGACTGGTGC 5343742 Query 53729 CTGATGTGCCCGAACGAGTGCCCCGGC 53755 ||||||||||| | || || || ||| Sbjct 5343741 TTGATGTGCCCGCATGAATGTCCTGGC 5343715 >seq488 Length=618892 Score = 96.9 bits (106), Expect = 4e-15 Identities = 245/371 (66%), Gaps = 19/371 (5%) Strand=Plus/Minus Query 158964 CTCTCCAGTCGCAATCACAAAGTCCTCTGGACCGGGCTGTTGGAGCATGAGCCACATGGC 159023 ||| || || |||||||| | |||| || | ||||| || ||||| | |||||| || Sbjct 325315 CTCGCCCGTAGCAATCACGTAATCCTGCGGTTCCGGCTGCTGTAGCATCATCCACATAGC 325256 Query 159024 CTCGACGTAATCCTGCGCGTGACCCCAGTCGCGCTTGGCATCCATGTTCCCGAGCTCGAT 159083 ||| ||||| ||||| |||||||||||||| ||||||| |||| || || ||||| | Sbjct 325255 CTCCACGTAGTCCTGTGCGTGACCCCAGTCTCGCTTGGAGTCCAGATTTCCCAGCTCCAA 325196 Query 159084 GACTT---TTCCA------GACTTTTTCCACTCAGCCA--GACCGAGCGTGATCTTGCGC 159132 | || || | || ||||| |||| |||| | || | || | | Sbjct 325195 GCATTCCATTTGATTGAGCGAAATTTTC------GCCACCGACC--GGGTAACTTTCCTC 325144 Query 159133 GTCACAAACTCTGCTCCGCGCCGTTCCGACTCATGGTTAAACAGAATGCCGGTACAAGCG 159192 ||||| || | | || ||||| |||||| ||||| ||||| || || | || || Sbjct 325143 GTCACGAAGTTCTCGCCTCGCCGGGGCGACTCGTGGTTGAACAGGATCCCATTGCAGGCA 325084 Query 159193 AACAGGTTATAGGACTCGCGGTAATTTTTAGTTATCCAGTATCCAAAGAGCTTGGAGACG 159252 |||| || | || || || || | |||||||| || | | |||| | Sbjct 325083 AACATCCCGTATGCTTCCCGATAGTTGATCACAATCCAGTAGCCGTACATTTTGGCGCAA 325024 Query 159253 CCGTATGGACTCCGAGGATAAAATGGTGTCCCCTCATTTTGAATTGGTTCCTGAACCTTT 159312 |||| ||| || ||||| || |||||| |||||| ||| | |||| |||||| Sbjct 325023 GCGTACGGAGATCGCGGATAGAACGGTGTCTTCTCATTCTGAGGCGTTTCCACGACCTTT 324964 Query 159313 CCAAACATTTC 159323 || ||| ||| Sbjct 324963 CCGTACAGTTC 324953 >seq1107 Length=3620151 Score = 95.1 bits (104), Expect = 1e-14 Identities = 204/299 (68%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||||||||| || | ||||| |||||| ||||| | || || || || ||||| Sbjct 318676 GTGAAGATGTAACGAGGACTGGCGCTATCCTTTCCACCAGAAAGACGAGTACCGAACTGA 318735 Query 152089 CCA-GAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 ||| ||| || || || |||| ||||||| || ||| | ||||| |||||||| || Sbjct 318736 CCACTCGGGATC-AGCAGATTGATGTTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGAC 318794 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 ||| || || ||| | |||||| || || || || | | || |||| | || Sbjct 318795 AATGGTACCGCACAGGGACTGTTCACCATGATGGTAGGCGGACATTTCAGCGACTGAACC 318854 Query 152208 CGCCAACTGCGCCACCTTCATGTC-CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 |||| ||| || ||||||| || || | ||| || ||||| || | | | || Sbjct 318855 GGCCAGCTGGGCGACCTTCACCTCACGCTTATCA--TTACGCTTGAAGCACGTGAACATG 318912 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||||| ||||| || || | ||||||||||| | ||||| || || || |||| Sbjct 318913 ACCTTTCGCTGACCGGGCTTGAGACCGTCCACCATGCACGGAATTGACCGAATGTTGTC 318971 >seq472 Length=3306290 Score = 95.1 bits (104), Expect = 1e-14 Identities = 204/299 (68%), Gaps = 6/299 (2%) Strand=Plus/Plus Query 152029 GTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGT 152088 ||||||||||| || | ||||| |||||| ||||| | || || || || ||||| Sbjct 1650474 GTGAAGATGTAACGAGGACTGGCGCTATCCTTTCCACCAGAAAGACGAGTACCGAACTGA 1650533 Query 152089 CCA-GAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 ||| ||| || || || |||| ||||||| || ||| | ||||| |||||||| || Sbjct 1650534 CCACTCGGGATC-AGCAGATTGATGTTGTTGCTTCCGACGTAGTTCTGGGCCAAATTGAC 1650592 Query 152148 AATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCC 152207 ||| || || ||| | |||||| || || || || | | || |||| | || Sbjct 1650593 AATGGTACCGCACAGGGACTGTTCACCATGATGGTAGGCGGACATTTCAGCGACTGAACC 1650652 Query 152208 CGCCAACTGCGCCACCTTCATGTC-CG-TCGTCAGGTTCTTCTTGAGACAGGCGTAAATC 152265 |||| ||| || ||||||| || || | ||| || ||||| || | | | || Sbjct 1650653 GGCCAGCTGGGCGACCTTCACCTCACGCTTATCA--TTACGCTTGAAGCACGTGAACATG 1650710 Query 152266 ACCTTGCGCTGGGATGGTTTCAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324 ||||| ||||| || || | ||||||||||| | ||||| || || || |||| Sbjct 1650711 ACCTTTCGCTGACCGGGCTTGAGACCGTCCACCATGCACGGAATTGACCGAATGTTGTC 1650769 >seq1902 Length=3516739 Score = 82.4 bits (90), Expect = 8e-11 Identities = 90/117 (77%), Gaps = 2/117 (2%) Strand=Plus/Plus Query 74784 ATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATG 74843 |||| || || || || | |||||| ||||| || || |||||||| | |||||| ||| Sbjct 3490336 ATCAGCTCGTTGGAGAAAGTAAGGCCGGGCATCAGGCCGCGCTTCTTGAGCCAAAATATG 3490395 Query 74844 G-CACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCG 74899 | | || ||| ||| ||||||||||||||||| || ||||||||||| | ||| Sbjct 3490396 GACGCA-AAGCTACCGCTGAAGAAGATGCCTTCCACGGCGGCAAAGGCGACCACGCG 3490451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547199344113000