Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aedes_20albopictus_20[refseq_20GCF_5F001876365.2_202017-01-09] 2,435 sequences; 2,247,306,217 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1902 86.0 5e-12 seq1662 82.4 7e-11 >seq1902 Length=3516739 Score = 86.0 bits (94), Expect = 5e-12 Identities = 211/320 (66%), Gaps = 0/320 (0%) Strand=Plus/Plus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 |||| || || || || ||||| || ||||| ||| ||||||||||| || |||| Sbjct 3490126 AGCAGTCTATCGGCCACGAATTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCAAGC 3490185 Query 4434 AATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 || || || || || | ||||| ||||| || || || || ||||| ||| Sbjct 3490186 AAATCAACCGGAAGGGCTTTCGTCAAGAACTCCTGCTCAATCAGCACTGCTTCCCGGATG 3490245 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 || || | | || | || ||||| | || | ||| |||| | || ||| Sbjct 3490246 ATTTCAATCACACGTTCCTGCGACGGTTTCTGAACCAGATATTTGAACATAAGGCAAGCA 3490305 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || || | || ||||| | | ||||| ||||| || || || | |||||| Sbjct 3490306 AAGTCCGTGTGTAGGCCCTCGTCACGGGAGATCAGCTCGTTGGAGAAAGTAAGGCCGGGC 3490365 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || | || | ||| || ||||||||||| | ||||| || ||||| |||||| Sbjct 3490366 ATCAGGCCGCGCTTCTTGAGCCAAAATATGGACGCAAAGCTACCGCTGAAGAAGATGCCT 3490425 Query 4674 TCTACGGCGGCAAACGCTAC 4693 || ||||||||||| || || Sbjct 3490426 TCCACGGCGGCAAAGGCGAC 3490445 >seq1662 Length=3905379 Score = 82.4 bits (90), Expect = 7e-11 Identities = 210/320 (66%), Gaps = 0/320 (0%) Strand=Plus/Minus Query 4374 AGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATT 4433 |||| || || || || ||||| || ||||| ||| ||||||||||| || |||| Sbjct 1651946 AGCAGTCTATCGGCCACGAATTCGATGTACTGCGACATCAGTTCGCAGTTCATGCCAAGC 1651887 Query 4434 AATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATT 4493 || || || || || | ||||| ||||| || || || || ||||| ||| Sbjct 1651886 AAATCAACCGGAAGGGCTTTCGTCAAGAACTCCTGCTCAATCAGCACTGCTTCCCGGATG 1651827 Query 4494 ATATCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCCAAACAATAAACACGCA 4553 || || | | || | || ||||| | || | ||| |||| | || ||| Sbjct 1651826 ATTTCAATCACACGTTCCTGCGACGGTTTCTGAACCAGATATTTGAACATAAGGCAAGCA 1651767 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || || | || ||||| | | ||||| ||||| || || || | |||||| Sbjct 1651766 AAGTCCGTGTGTAGGCCCTCGTCACGGGAGATCAGCTCGTTGGAGAAAGTAAGGCCGGGC 1651707 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 || | || | ||| || ||||||||||| | ||||| || ||||| |||||| Sbjct 1651706 ATCAGGCCGCGCTTCTTGAGCCAAAATATGGACGCAAAGCTACCGCTGAAGAAGATGCCT 1651647 Query 4674 TCTACGGCGGCAAACGCTAC 4693 || |||||||| || || || Sbjct 1651646 TCCACGGCGGCGAAGGCGAC 1651627 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427036926635855