Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq146 131 4e-25 seq741 89.7 1e-12 seq104 89.7 1e-12 seq79 89.7 1e-12 seq61 89.7 1e-12 seq29 89.7 1e-12 seq7 89.7 1e-12 >seq146 Length=372164 Score = 131 bits (144), Expect = 4e-25 Identities = 258/378 (68%), Gaps = 8/378 (2%) Strand=Plus/Plus Query 61084 TTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAA 61143 ||| ||| || || || || ||| ||||||| || || ||| | || || || |||| Sbjct 170052 TTTATCAGGCCTCCACGTCGGAATTGTATGGGAAGGTGGCCGAAGTGCCACAGACTGAAA 170111 Query 61144 GGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGAT-- 61201 || ||||||||||| | || |||| ||| ||||| |||||||||||||| Sbjct 170112 CCACCCCGTTTTATCCCAGATCGCCTTATGCATGTGCTAAACTGTACGCTTACTGGATCG 170171 Query 61202 TTGTAAAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATTTGTTTCAATCA 61261 | || ||||| | ||| | ||||| ||||||| ||||| |||| || ||||| Sbjct 170172 TCGT--TAATTATAGGGAGGCTTATGGTATGTTTGCGTGTAATGGTATTTTGTTTAATCA 170229 Query 61262 CGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAA 61321 || ||||||| |||| | |||||| || | |||||||| | || || || || Sbjct 170230 TGAAAGTCCCAGGCGAGGAGAGACGTTTGTTACCAGAAAAATTACAAGGGAAGTGGCCAA 170289 Query 61322 TAT--TTTTAACGGTGTCGAAAAATGCATGTATCTAGGAAACATAGACTCTAAAAGAGAT 61379 || || | ||| | | || | || || || |||| || |||||||| Sbjct 170290 GATCCACTTGGGATTATCG--CAGTTTTTGGAACTGGGTAATCTAGATTCCAAAAGAGAC 170347 Query 61380 TGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCA 61439 |||||| |||| |||| || | || ||||||||| ||||| | |||||||| | ||| Sbjct 170348 TGGGGACATGCTAAAGACTACGTTGAAGCTATGTGGATGATGCTACAACAAGAATCACCA 170407 Query 61440 GATGACTACGTTATTGCG 61457 ||||| | || |||||| Sbjct 170408 GATGATTTTGTAATTGCG 170425 >seq741 Length=66174 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 56543 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 56484 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 56483 CCCACGTTGGGC 56472 >seq104 Length=478485 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 282205 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 282264 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 282265 CCCACGTTGGGC 282276 >seq79 Length=552015 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 62360 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 62419 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 62420 CCCACGTTGGGC 62431 >seq61 Length=616109 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 196849 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 196908 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 196909 CCCACGTTGGGC 196920 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 198483 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 198542 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 198543 CCCACGTTGGGC 198554 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 199233 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 199174 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 199173 CCCACGTTGGGC 199162 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 199488 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 199547 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 199548 CCCACGTTGGGC 199559 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 200567 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 200626 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 200627 CCCACGTTGGGC 200638 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 205680 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 205621 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 205620 CCCACGTTGGGC 205609 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 206062 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 206121 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 206122 CCCACGTTGGGC 206133 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 199929 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 199988 Query 165770 CCCACGATGGGC 165781 |||||| | ||| Sbjct 199989 CCCACGTTTGGC 200000 >seq29 Length=842143 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 201731 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 201790 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 201791 CCCACGTTGGGC 201802 >seq7 Length=1681418 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||| Sbjct 1558403 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 1558462 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 1558463 CCCACGTTGGGC 1558474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057782486027690