Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq5 98.7 8e-16 seq153 96.9 3e-15 >seq5 Length=1768869 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 20947 TTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCG 21006 |||| |||| || | ||||| | ||||||||| || |||||||||||||||||||| | Sbjct 907825 TTCCACCTCTTAGGCGAAGCACAAGATGCAAAGTTGATTCCTTTTGAATGTTATAGTCAG 907884 Query 21007 CCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGG 21066 ||| || | |||| || | |||||||| || | || || | || || || || Sbjct 907885 ACAGAGTACGTCCGTCTTCTAATTGTTTGCCAGCGAAGATCAGACGTTGTTGATCTGGGG 907944 Query 21067 GCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCG 21126 | | ||||| || || || ||| || || | ||| || ||| || || Sbjct 907945 GGATACCTTCTTTATCTTGAATTTTTGCCTTTACATTTTCGATTGTGTCAGACGGTTCAA 908004 Query 21127 TTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 ||||| |||||| || || || || || |||||||| ||||||||||| Sbjct 908005 CTTCCAAGGTAATTGTTTTTCCTGTCAATGTTTTGACGAATATTTGCAT 908053 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || || || |||| ||| | |||||| || ||||||||||| ||||| | Sbjct 910108 CCTCCTCTCAATCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAG 910167 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || ||| | | ||||| || |||||||| ||| | || | | || || || ||| Sbjct 910168 AGAGTTCTGCCATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGGGGA 910227 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||||| || || || || ||||| | ||| || ||| || || | Sbjct 910228 ATACCTTCTTTATCCTGAATTTTAGCCTTCACATTTTCGATTGTGTCAGATGGTTCAACT 910287 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 |||| || || ||||| || || || |||||||||||||||||||| Sbjct 910288 TCCAAAGTTATCGTCTTTCCTGTCAAAGTTTTGACAAATATTTGCAT 910334 >seq153 Length=365504 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || |||| || | |||||||| || | ||||||||||| || ||||| ||||| | | Sbjct 156776 CCACCTCTGAGACGGAGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAC 156835 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 | || | | ||||||| |||||| || || | || || | |||||||| || Sbjct 156836 AATGTACGTCCATCCTCCAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGTGGA 156895 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | ||| |||||||| ||| || ||| || | ||| || ||| |||||| Sbjct 156896 ATGCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCGACC 156955 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTG 21179 || | || ||||||||||| || | |||||| || || ||||||||| || Sbjct 156956 TCAAGAGTGATGGTCTTGCCAGTCAGCGTTTTCACGAAAATTTGCATTGTG 157006 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422243436932108