Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq5 118 2e-21 seq66 102 1e-16 >seq5 Length=1768869 Score = 118 bits (130), Expect = 2e-21 Identities = 100/123 (81%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 146065 TAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGTTCTGCTATC 146124 ||| |||||||| || || |||||||| |||||| || ||||||||||| | | ||| Sbjct 907613 TAAAACCAAATGCAACGTGGATTCTTTTTGTATATTGTAGTCTGAAAGAGTACGTCCATC 907672 Query 146125 ATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCCTTCTTTATC 146184 || |||||||| |||||||||||||| | ||| || || || ||||| ||||||||||| Sbjct 907673 TTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 907732 Query 146185 TTG 146187 ||| Sbjct 907733 TTG 907735 Score = 116 bits (128), Expect = 6e-21 Identities = 108/137 (79%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | ||||| ||||| ||| | ||| |||||||| || || || ||||| Sbjct 910108 CCTCCTCTCAATCTTAGTACCAGATGAAGAGTGGATTCTTTTTGAATGTTGTAGTCTGAG 910167 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||||| ||| |||| |||||| |||||||| || || | ||| ||||| || ||| Sbjct 910168 AGAGTTCTGCCATCCTCTAGTTGTTTGCCAGCAAAGATTAAACGTTGTTGATCTGGGGGA 910227 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||||||||| || Sbjct 910228 ATACCTTCTTTATCCTG 910244 Score = 107 bits (118), Expect = 3e-18 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| |||| |||||| | ||||||||| | |||||||| || || |||||||| | Sbjct 910562 TTCCTCCTCGAAGTCTCAGTACCAAATGCAGTGTAGATTCCTTTTGGATGTTATAATCAG 910621 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 | | || | | || |||| |||||| |||||||| |||| | ||| ||||| || | Sbjct 910622 ACAAGGTGCGTCCGTCTTCTAGTTGTTTGCCAGCAAAGATCAGACGTTGTTGATCTGGGG 910681 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| ||||||||||| || |||||||| ||| | Sbjct 910682 GAATACCTTCTTTATCCTGAATTTTTGCCTTTACATTCTCAATTGTATCTGAGGGTTCCA 910741 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||||| ||||| |||||||| |||||||| || | || || |||||| Sbjct 910742 CTTCTAAAGTGATGGTTTTACCAGTTAATGTCTTGACAAAGATCTGCATT 910791 Score = 100 bits (110), Expect = 4e-16 Identities = 157/230 (68%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCT 146107 |||||||||| || | | || | ||| ||||| ||||| ||| || || ||||| || Sbjct 907825 TTCCACCTCTTAGGCGAAGCACAAGATGCAAAGTTGATTCCTTTTGA-ATGTTATAGTCA 907883 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 || ||||| | | || ||||||||||| ||||| || |||| | ||| ||||| || Sbjct 907884 GACAGAGTACGTCCGTCTTCTAATTGTTTGCCAGCGAAGATCAGACGTTGTTGATCTGGG 907943 Query 146168 GGAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCT 146227 || || |||||||||||||| || || || ||| Sbjct 907944 GGGATACCTTCTTTATCTTGAATTTTTGCCTTTACATTTTCGATTGTGTCAGACGGTTCA 908003 Query 146228 ACTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 ||||| | || |||||||| ||||| |||||||| | |||||||||||| Sbjct 908004 ACTTCCAAGGTAATTGTTTTTCCTGTCAATGTTTTGACGAATATTTGCAT 908053 Score = 95.1 bits (104), Expect = 2e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| |||| | ||||| || | || ||||| || || || || ||||| Sbjct 909652 CCTCCTCTCAGTCGAAGAACCAAGTGAAGGGTGGATTCCTTTTGGATGTTGTAGTCTGAC 909711 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || || |||| ||| || |||||||| |||||||| || | | ||| ||||| |||||| Sbjct 909712 AGGGTCCTGCCATCTTCCAATTGTTTGCCAGCAAAGATAAGACGTTGTTGATCTGGAGGA 909771 Query 146171 ATTCCTTCTTTATCTTG 146187 |||||||||||||| || Sbjct 909772 ATTCCTTCTTTATCCTG 909788 >seq66 Length=580730 Score = 102 bits (112), Expect = 1e-16 Identities = 154/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | ||| | ||||||||||| ||||||||||| ||||| || || ||| Sbjct 319801 CCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAA 319860 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || | |||||| || || || || | | ||||||||| || ||| Sbjct 319861 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGA 319920 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || || || || || ||| ||| ||| Sbjct 319921 ATACCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 319980 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || || || |||||||| || ||||| ||||| | ||| || ||||| Sbjct 319981 TCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCAT 320027 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | || | ||||||||| | |||||||| || || || || || | Sbjct 317744 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 317803 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 317804 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 317863 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| |||||||| || || || || ||| ||| | Sbjct 317864 GAATACCTTCTTTGTCCTGGATTTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 317923 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| || ||||||||||| || ||||| ||||| | ||| || |||||| Sbjct 317924 CTTCCAGAGTGATTGTTTTCCCGGTTAAAGTTTTTACGAAAATCTGCATT 317973 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | ||| | ||||||||||| ||||||||||| ||||| || || ||| Sbjct 320029 CCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAA 320088 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || | |||||| || || || || | | ||||||||| || ||| Sbjct 320089 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGA 320148 Query 146171 ATTCCTTCTTTATCTTG 146187 || ||||| || || || Sbjct 320149 ATACCTTCCTTGTCCTG 320165 Score = 98.7 bits (108), Expect = 1e-15 Identities = 153/227 (67%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || || || | ||| | ||||||||| | ||||||||||| ||||| || || ||| Sbjct 320483 CCTCCCCTCAATCTGAGTACCAAATGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAA 320542 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 || ||||| | ||| || | |||||| ||||| || || | | ||| ||||| |||||| Sbjct 320543 AGGGTTCTTCCATCCTCAAGTTGTTTACCAGCGAAGATGAGACGTTGTTGATCTGGAGGA 320602 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || || || ||||||||| ||| ||| Sbjct 320603 ATGCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTATCTGAAGGTTCAACT 320662 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || || ||||| ||||| || || |||||||| | || || ||||| Sbjct 320663 TCAAGAGTGATGGTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 320709 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | || | ||||||||| | |||||||| || || || || || | Sbjct 319116 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 319175 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 319176 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGCG 319235 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| |||||||| || || || || ||| ||| | Sbjct 319236 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGA 319295 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| || || |||||||| || ||||| ||||| | ||| || |||||| Sbjct 319296 CTTCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCATT 319345 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/230 (67%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | ||| | ||||||||| | |||||||| || || || || || | Sbjct 319344 TTCCTCCCCTCAATCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 319403 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 319404 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 319463 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| |||||||| || || || || || ||| | Sbjct 319464 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAGGGTTCGA 319523 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| || || |||||||| || ||||| ||||| | ||| || |||||| Sbjct 319524 CTTCCAGAGTAATTGTTTTTCCGGTTAAAGTTTTTACGAAAATCTGCATT 319573 Score = 95.1 bits (104), Expect = 2e-14 Identities = 153/227 (67%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110 || ||||| | ||| | ||||||||||| ||||||||||| ||||| || || | | Sbjct 320256 CCTCCTCTCAATCTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAG-A 320314 Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170 |||||||| | ||| || | |||||| || || || || | | ||||||||| || ||| Sbjct 320315 AGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGA 320374 Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230 || ||||| || || || || || ||| ||| ||| Sbjct 320375 ATGCCTTCCTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCGACT 320434 Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277 || || ||||||||||| || ||||| ||||| | || || ||||| Sbjct 320435 TCCAGAGTGATTGTTTTTCCGGTTAAAGTTTTTACAAAAATCTGCAT 320481 Score = 93.3 bits (102), Expect = 6e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | ||| | ||||||||| | |||||||| || || || || || | Sbjct 318887 TTCCTCCCCTCAATCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 318946 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 318947 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 319006 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| || || Sbjct 319007 GAATACCTTCTTTGTCCTG 319025 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/230 (67%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | || | ||||||||| | |||||||| || || || || || | Sbjct 318660 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 318719 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 318720 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGG-G 318778 Query 146169 GAATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTA 146228 |||| |||||||| || || || || ||| ||| | Sbjct 318779 GAATACCTTCTTTGTCCTGGATCTTAGCCTTTACATTTTCAATGGTGTCAGAAGGTTCAA 318838 Query 146229 CTTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATT 146278 |||| || || |||||||| || ||||| ||||| | ||| || |||||| Sbjct 318839 CTTCCAGAGTAATTGTTTTTCCAGTTAAAGTTTTTACGAAAATCTGCATT 318888 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | || | ||||||||| | |||||||| || || || || || | Sbjct 318200 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 318259 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 318260 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 318319 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| || || Sbjct 318320 GAATACCTTCTTTGTCCTG 318338 Score = 89.7 bits (98), Expect = 8e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTG 146108 |||| || || | || | ||||||||| | |||||||| || || || || || | Sbjct 319572 TTCCTCCCCTCAACCTGAGTACCAAATGAAGTGTAGATTCCTTCTGAATGTTGTAGTCAG 319631 Query 146109 AAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAG 146168 |||||||||| | ||| || | |||||| || || ||||| | | ||||||||| || | Sbjct 319632 AAAGAGTTCTTCCATCCTCAAGTTGTTTACCGGCGAAAATGAGACGTTGCTGATCTGGGG 319691 Query 146169 GAATTCCTTCTTTATCTTG 146187 |||| |||||||| || || Sbjct 319692 GAATACCTTCTTTGTCCTG 319710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743497932232960