Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq153 98.7 6e-16 seq66 87.8 1e-12 >seq153 Length=365504 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 ||||||| ||| | || || ||||| |||||||||||||||| ||| | || Sbjct 156791 AGCACCAAGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGACAATGTACGTCCATCC 156850 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 |||||||| || || ||||| || || || |||||||| || | || ||||||||| Sbjct 156851 TCCAACTGTTTACCGGCGAAGATCAGACGTTGCTGGTCTGGTGGAATGCCCTCCTTGTCT 156910 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | || | |||| || | | ||||| || | |||||||| Sbjct 156911 TGGAT-TTTGGCTTTGACATTCTCGATCGTGTCAGAGGGCTCGACCTCAAGAGTGATGGT 156969 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || || |||||||| || || ||||| Sbjct 156970 CTTGCCAGTCAGCGTTTTCACGAAAATTTGCAT 157002 >seq66 Length=580730 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 || || |||| |||| ||| ||||||||| || |||||||| || || | | Sbjct 320041 CTAAGTACCAAATGTAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGAGTTCTTCCA 320100 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || || | || || || ||||| ||||| || ||||| || ||| | | |||||| Sbjct 320101 TCCTCAAGTTGTTTACCGGCGAAGATGAGACGTTGCTGATCTGGGGGAATACCTTCCTTG 320160 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || ||||| ||||| || | || | || | | |||||| |||| |||||| Sbjct 320161 TCCTGGATCTTAGCCTTTACATTT-CAATGGTGTCTGAAGGTTCGACTTCCAGGGTGATG 320219 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| | |||||| ||||| |||||||| Sbjct 320220 GTTTTCCCGGTTAAAGTTTTTACAAAAATCTGCAT 320254 Score = 82.4 bits (90), Expect = 5e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 34175 CTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCG 34234 || || |||| || | ||| ||||||||| || |||||||| || || | | Sbjct 320495 CTGAGTACCAAATGAAGTGTAGATTCTTTCTGAATATTGTAGTCAGAAAGGGTTCTTCCA 320554 Query 34235 TCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTG 34294 || || | || || || ||||| ||||| || || || || || | || |||||| Sbjct 320555 TCCTCAAGTTGTTTACCAGCGAAGATGAGACGTTGTTGATCTGGAGGAATGCCTTCCTTG 320614 Query 34295 TCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATG 34354 || ||||| ||||| || | || | ||| | | ||| || || | |||||| Sbjct 320615 TCCTGGATCTTAGCCTTTACATTTTCAATGGTATCTGAAGGTTCAACTTCAAGAGTGATG 320674 Query 34355 GTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||||||| || | |||||||||||||||||||| Sbjct 320675 GTTTTGCCAGTCAATGTTTTCACAAAGATCTGCAT 320709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323059939621280