Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq286 118 8e-22 >seq286 Length=205596 Score = 118 bits (130), Expect = 8e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 20335 ATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTG 20394 ||||||| || || | || | || || || | ||||| |||||| | | ||| || Sbjct 27242 ATTAAAAATAAACCGACTGATCGCAGGATGATAATGTGCGCATGGAACCCAATAGACTTG 27183 Query 20395 CCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATAATGAA 20454 || ||||||||||| || ||||| || || || | ||| || || | ||| Sbjct 27182 CCGGAGATGGCTTTGCCCCCCTGTCACTGTCTCGTGCAGTTCTTCGTCGCCAACGACGAA 27123 Query 20455 TTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCTTTCAATATT 20514 |||||||| |||| || || ||||| || ||||| |||| || |||||||| || Sbjct 27122 TTGTCGTGCATGTTGTACCAGCGTTCCGCCGACATGGGTTTGGGCGTGCCTTTCAACATC 27063 Query 20515 GCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAA 20564 |||||||| || |||||||| || |||||||| ||||| || ||||| || Sbjct 27062 GCAAGTTACGCCCTGCTTACTTACATGATTGCGCATGTCACCGATTTGAA 27013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399169098336535