Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Aethina_20tumida_20[refseq_20GCF_5F001937115.1_202017-01-05] 3,063 sequences; 234,344,249 total letters Query= NC_003094.2 Length=130759 Score E Sequences producing significant alignments: (Bits) Value seq5 109 5e-19 seq66 86.0 5e-12 >seq5 Length=1768869 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 ||||| |||||||| ||||| || || || || |||||||| | || || ||| | Sbjct 910334 ATGCAAATATTTGTCAAAACTTTGACAGGAAAGACGATAACTTTGGAAGTTGAACCATCT 910275 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| |||| |||||| | |||||||| | || || || Sbjct 910274 GACACAATCGAAAATGTGAAGGCTAAAATTCAGGATAAAGAAGGTATTCCCCCAGATCAA 910215 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 ||||||||||| | ||| ||||||||||| || ||| || ||| | || |||| | Sbjct 910214 CAACGTTTAATCTTTGCTGGCAAACAACTAGAGGATGGCAGAACTCTCTCAGACTACAAC 910155 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGGT 25059 || || ||||| |||| |||||| | || || ||||| | |||||| Sbjct 910154 ATTCAAAAAGAATCCACTCTTCATCTGGTACTAAGATTGAGAGGAGGT 910107 >seq66 Length=580730 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24832 ATGCAGATATTTGTTAAAACCTTAACCGGCAAAACGATAACCGTCGATGTCGAATCGAGC 24891 |||||||| || || ||||| |||||||| ||||| || || | || |||||| | Sbjct 318200 ATGCAGATTTTCGTAAAAACTTTAACCGGAAAAACAATTACTCTGGAAGTCGAACCTTCT 318141 Query 24892 GACAGTGTAGAAACTGTTAAGGAAAAAATTGCTGCAAAAGAAGGCGTACCGGTTGACCAG 24951 |||| | |||| ||| |||| ||||| | |||||||| | || || ||| Sbjct 318140 GACACCATTGAAAATGTAAAGGCTAAAATCCAGGACAAAGAAGGTATTCCCCCAGATCAG 318081 Query 24952 CAACGTTTAATATATGCGGGCAAACAACTGGAAGATTCCATGACTATGAACGATTACAGC 25011 || ||| | || | || || |||||||| |||||| | ||| | || |||| | Sbjct 318080 CAGCGTCTCATTTTCGCCGGTAAACAACTTGAAGATGGAAGAACTCTTTCTGACTACAAC 318021 Query 25012 ATACAGAAAGAGGCCACGCTTCATTTAGTGTTACGATTGCGCGGAGG 25058 || ||||| || | || ||||||||||| | | ||| | ||||| Sbjct 318020 ATTCAGAAGGAATCTACACTTCATTTAGTACTCAGGTTGAGGGGAGG 317974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418288384580960